Labeo rohita (rohu): 127176799
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Entry
127176799 CDS
T09007
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127176799 (vps53)
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Others
EARP complex
127176799 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
127176799 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
Tropomyosin
COG3_N
O_Spanin_T7
FUSC
DUF677
VPS51_Exo84_N
Med11
ING
MCPsignal
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
127176799
NCBI-ProteinID:
XP_050984542
LinkDB
All DBs
Position
15:complement(22970009..23004800)
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AA seq
832 aa
AA seq
DB search
MMEDDELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEESFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNDGPGQKKPETPLEPTNPFLEDESGEDNVSEKDEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSTNSGGLTISSLLKEKEGSEV
AKFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRS
EQSTMLELFRQRLPNPPSGPDSGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatgacgaattagagtttgtggaagatttggaggcgatattacaccttact
ccagaagtccagctggccattgagcaggttttccccagccaagaccctttggatcgagcc
gacttcaatgctgttgaatacattaataccttgtttccaacagaacagtcactggcgaac
atagatgaagtggtgaataacattcgacttaaaatcagacgactggatgacaacatcagg
acagtggtgaggggacagaccaatgtggggcaagatggcagacaggcgttggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcggagaaa
tcggagcaaatggtgaaagagatcacacgggacatcaagcagttggaccatgcaaagcgc
cacctgaccacttcaataaccaccctcaatcatctgcacatgctggctggtggtgttgac
tctcttgaagctatgacccgaaagaggcagtacggggaggtggccaatctccttcagggt
gtagtcaacgtgctcgagcacttccagaagtacatgggcatccctcagatacgccagctc
tcagagagagttaaagctgcacagagcgagcttggcacacagatactggccgatttcgaa
gagtcttttcctgcccaggggtcaaagaaatctggaggtcctagcattgttctcagagat
gcctgcttggtggcgaatgtcctggatcctcggattaaacaggagatcatcaaaaagttc
atcagacagcacctttcagaatacctagtgctcttccaagagaaccaggatgtggcatgg
cttgacaagatagatcgacgctatgcgtggatcaagcgccagcttgtggactacgaagaa
aagtatggacgaatgttccctgaggagtggtgcatgactgaacgcatcgctgtagagttc
tgtcatatcaccagaaccgagctggccaagctgatgcgaacccgtgccagggagatcgag
gtcaagcttttgctcttcgctattcaaaggaccaccaatttcgaaggactgctggctaag
cgcttctctggctgcaccctgaacgacgggcctgggcagaagaagcctgagacgcctcta
gaaccgacaaacccctttttggaagatgagtcaggagaggacaacgtctcagaaaaggat
gaagatttggacaggccaaagaagcccaaggctccagacaacccgttccatggcattgtg
tcgaagtgctttgagcctcatctctacgtttacattgagtcccaggataaaaatcttggc
gagctgatcgaccgttttgttgctgatttccgggcacagggtccccctaaatcaggtaca
gatgagggaggcgctgtgctccccagctgtgcagatctctttgtgtactacaagaagtgt
atggtccagtgctcgcaactgagcaccggagagcccatgattgctctgaccactatcttc
cagaaatatctgcgcgagtacgcctggaagatcctctctgggaacctaccaaagaccagc
accaatagtggtggtctaaccatcagcagcttgctaaaggagaaagagggatcagaagtg
gccaagttcacaatggaagagctgtgtcttatttgcagcatcttaagcactgccgaatac
tgcctggctaccacacagcagttggaagagaagctcaaggagaaggtggacaagtcccta
atggagagaatcaacttaactggggagatggacacgtttagcacggttatctcaaacagt
atccagctcttggttcaggacctggacgctgcatgtgatccagccctcacggctatgagc
aagatgccttggcagagtgtagaacatgtgggagaccaaagcccgtatgtgacctctgta
atcatgcacatcaaacaaaatgtgcccatcattagagacaacctggcctccacccggaaa
tacttcacccagttctgcattaagttcaccaactccttcattccaaagttcatcaaccac
ctgttcaggtgtaaaccaatcagcatggttggagcagagcagttactcctggacacacat
tccctcaagacggttcttctagacctcccttccattggctctcaggtggtccgtaaagcc
ccggccagctacaccaaaatagtggttaaaggaatgactcgagcggagatgatcctcaag
gtggtcatggcccctcacgagccatccgtggtctttgtggacaactacatcaagctcctt
gctgacagcaatccggagacgttccagaagattctagacatgaagggcctaaaacggagt
gagcagagcaccatgctagagctgttcagacagaggttgcctaatccaccatctggacca
gacagtggtccatcattgtccttcagtgcccccacccctgaacaagaatcatcccgtatc
cgcaaactggaaaagctcatcaaaaagaggattcaataa
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