Labeo rohita (rohu): 127176874
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Entry
127176874 CDS
T09007
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127176874 (taf15)
09122 Translation
03015 mRNA surveillance pathway
127176874 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127176874 (taf15)
Spliceosome [BR:
lroh03041
]
Complex A
Other components
Complex A specific factors
127176874 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_7
Motif
Other DBs
NCBI-GeneID:
127176874
NCBI-ProteinID:
XP_050984665
LinkDB
All DBs
Position
15:complement(1372226..1380962)
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AA seq
443 aa
AA seq
DB search
MASDSGYGQPGAQQSYGSYGGSQGYPGGQQGYGQGNGSGSYSAQSYGSYGQSGGESYGQS
TQGYSSGGYGQQQQQPPQPPPQQQPGYDSYGQQGSESSSSYGDKSYGQQRSYGQQSGGGA
GGGAYSQSSGSYGGSQGGYVRRNDGDNRRFGDDSGSDRSEGFRGRGRGGYDRGGYDRGGY
DRGGRGGPPSGMGGGDRGGYKNYGGPRDYSQKDDGDGDQDNSDNNTIFVQGLGEDVTTDE
VGDYFKQIGIIKVNKKTGKPMINLYTDKATGRLKGEATVSFDDPPSAKAAIDWFDGKEFN
GRPIKVSFATRRAEFTQRGGGGGGGGRGRGGFRGRGGFGGGPSFDVKGGDWPCPNSSCGN
MNFARRYECNRCGTPKPEGDSFGDDRGGRGGYGGDRGDRGGFRGGRGGGGFRGGDRGGYG
GGGGGYKMGGRGDHREERRGRPY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagattcaggctacgggcagcctggcgctcaacaaagctacggatcttatggt
ggatcccagggctatccaggaggacagcagggatatggccaaggcaacgggagcggctct
tacagtgcacagagttatggcagttatggacagtctggtggagagagttatggccagtct
actcagggttattcctctggtggttatggtcaacaacaacagcaaccgccgcagcctcct
cctcagcagcagccgggctatgacagctatggacagcagggatctgaatcctcgtccagt
tatggcgataagtcatacgggcagcagcgatcttacggacaacagtcaggaggaggtgct
ggtggaggtgcgtacagccagtccagtggctcatacggggggtctcaaggtggatatgtg
cgacgcaatgatggtgataaccggaggtttggcgatgacagtggctctgacaggtcggag
ggtttcaggggcagaggtcgtgggggttatgatcgtggtggttatgaccgcggaggctac
gacagaggtggccgtggcggcccaccctccggtatgggtggtggtgaccgtggtggctac
aaaaattacggtggacccagagactacagtcaaaaggatgatggagatggcgatcaggat
aactcggacaataacaccatctttgtccaaggtcttggtgaagatgtgaccactgatgaa
gtgggtgactacttcaaacaaattggaataattaaggtcaataagaagactggcaaacct
atgatcaacctgtacaccgataaagccaccggacgactgaagggtgaagccacagtgtcc
tttgatgatcctccctcagccaaagctgccattgactggtttgatggaaaagagttcaat
ggaagacccatcaaggtgtcattcgctaccagaagggctgagttcacccagcgaggagga
ggaggaggaggtggtggacgaggacgtggtggttttcgaggcagagggggctttggtgga
ggtccctcgtttgatgtcaagggtggagattggccttgtcccaacagctcttgtggcaac
atgaactttgctagaagatacgaatgtaacaggtgtggaacgccaaaaccagaaggtgac
agctttggagatgatcgtggtggtcgaggcggatatggaggtgatcgtggggaccgcggc
ggatttagaggaggcagaggaggtggcggcttccggggtggagaccgtggaggatacggc
ggcggcggtggaggatacaaaatgggtggaaggggagaccacagagaggagagacgaggc
cggccgtactga
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