Labeo rohita (rohu): 127176897
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Entry
127176897 CDS
T09007
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04520
Adherens junction
lroh04530
Tight junction
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176897 (actn4)
04520 Adherens junction
127176897 (actn4)
04530 Tight junction
127176897 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127176897 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127176897 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127176897 (actn4)
04147 Exosome [BR:
lroh04147
]
127176897 (actn4)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127176897 (actn4)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127176897 (actn4)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127176897 (actn4)
Exosomal proteins of colorectal cancer cells
127176897 (actn4)
Exosomal proteins of bladder cancer cells
127176897 (actn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Uds1
Motif
Other DBs
NCBI-GeneID:
127176897
NCBI-ProteinID:
XP_050984694
LinkDB
All DBs
Position
15:35383088..35434872
Genome browser
AA seq
901 aa
AA seq
DB search
MVDYHAANSQTQYSAGGQQSYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQ
IENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIG
AEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHI
SWKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIVNTA
RPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIR
RTIPWLENRAPEKTMTEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRP
AFMPSEGRMVSDINGAWHKLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWTD
GKEAMLTQKDYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPS
VNARCQKICEQWDALGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMED
LQDMFIVHNIEEIQGLITAHDQFKSTLPEANKEREAIQAIQAEVQKIAQYNGIKLAGNNP
YTTITPQSIDKKWEKVQQLVPQRDQALQEELGRQQSNDHLRRQFANQANMIGPWIQNKME
EIGRISIEMNGTLEDQLTHLRQYEQSIIEYKPKIDQLEGDHQLIQEALIFDNKYTAYTME
HLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGVLHAEEF
KACLISLGYDVENDKQGDAEFARIMGIVDPNNSGAVTFQAFIDFMSRETTDTDTADQVIA
SFKILAGDKNYITAEELRRELPPDQAEYCIARMAPYSGPDAVPGALDYMSFSTALYGESD
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgccgctaatagtcaaacccaatattcggcgggaggccagcagagc
tacatggagcaagagaacgattgggaccgggacctgctgctagacccggcctgggagaaa
cagcagcggaagactttcacggcctggtgcaactctcacctgcggaaggcgggaacgcag
atcgagaacatcgaggaggatttcagagatggactcaaactcatgctgctcctagaggtc
atctcaggggagaggttaccaaaacctgaaagaggcaagatgagagttcacaagatcaac
aacgtcaacaaagcgctggacttcatcgccagcaaaggagtcaaactggtgtccatcggc
gcagaagaaatcgtggatggaaatgccaagatgactctgggaatgatttggaccatcatc
ctccgcttcgccatccaggacatctcagtggaggaaacctccgctaaagaaggactgttg
ctctggtgtcagagaaagacggctccttacaagaacgtcaacgttcagaacttccatatc
agctggaaggatggtctcgccttcaatgctctgatccacagacacaggccagagctcatc
gattatgacaagctgagaaaggacgacccagtgaccaatctgaacaacgctttcgaagtg
gcagagcgatatcttgacatccccaagatgttggacgcagaggacattgtgaatacagca
cgtccagatgagaaagccataatgacctatgtgtccagtttctaccatgccttttctgga
gcccagaaggctgagaccgcagccaatcgtatttgcaaggtgttggcggtcaatcaggag
aacgagcacctgatggaggactatgaaaaactggccagcgatctgttggagtggattcgt
aggacaattccatggttggaaaaccgtgctccagagaaaaccatgacagagatgcagcag
aagttggaagatttccgtgattaccgccgcgttcacaaaccacccaaagttcaggagaag
tgtcagctggagatcaacttcaacacattgcagaccaaactccgtctgagcaaccgacca
gcctttatgccatctgaggggcgcatggtgtccgacattaatggtgcttggcataaactg
gaaggggccgagaaaggctatgaagagtggctactgaatgagatccgtcgcttggagaga
cttgaccatcttgcagaaaagttccgtcagaaagcagccatccatgaaagctggacagat
ggtaaggaggccatgctaacacagaaggactatgagactgcatctctgtctgagatcaaa
gctctcctgaagaagcatgaggcattcgaaagtgaccttgccgcccaccaggacagagtg
gagcagattgccgccattgcacaggagctcaatgagctggactactacgactccccgagc
gttaatgcacgctgtcagaagatctgtgaacaatgggatgctctgggttccctcacacag
agtcgcagagagtccctcgagagaacagagaaacagctggagtctattgatgagctgtac
ctggagtatgccaagagagcagcgccattcaacaactggatggagggagccatggaggac
cttcaggacatgttcattgtacacaacatcgaggaaatccagggactgataacagctcac
gaccagttcaaatcaactcttccagaggcgaataaagagcgggaagctatccaggccatc
caggctgaagttcagaaaatcgcacagtacaatggcatcaaactggcaggaaacaatcct
tacaccaccatcacccctcagagcattgacaagaagtgggagaaggtgcagcaactggtt
ccacagcgtgatcaggctcttcaggaagaactcggacgtcagcagtctaatgaccatctc
agacgccagtttgccaaccaggccaacatgattggaccatggatccaaaataagatggag
gagattggccggatatcaattgagatgaatggaacgctggaagatcagctgacccacctc
cgtcagtatgagcagagcatcatcgaatacaaacctaaaattgaccaactggagggagac
catcagctcattcaggaagcacttatatttgacaacaaatacactgcttacactatggag
caccttcgtgttggttgggagcaattgcttactacaattgcccgcaccattaatgagatc
gagaaccagattctgactcgtgatgctaaaggcatcagccaggagcagcttcacgagtac
cgcacgtccttcaatcacttcgacaaggaccacagtggtgtcttgcacgccgaggagttc
aaggcttgtttgatcagtctgggttacgacgtagaaaacgacaagcagggtgatgctgaa
tttgctcgtattatgggcattgttgaccccaacaacagcggcgcagtgaccttccaggct
ttcattgacttcatgtcaagggaaacaactgacacagacaccgctgaccaggtcatcgcc
tcatttaagatcctggctggagacaagaactacatcacagctgaggagttgaggcgtgag
cttcctcccgaccaggcagagtactgcattgcccgaatggcaccatactctggccccgac
gcggtgccgggtgctcttgactacatgtccttctccaccgctctgtatggggagagcgac
ctctaa
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