Labeo rohita (rohu): 127176950
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Entry
127176950 CDS
T09007
Symbol
lsamp
Name
(RefSeq) limbic system-associated membrane protein
KO
K06772
limbic system-associated membrane protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127176950 (lsamp)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
IgLON family
127176950 (lsamp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_2
Ig_PDGFR_d4
Izumo-Ig
Ig_IgSF3
C2-set_3
Ig_MYOM1
Sp38
ZK512_Ig
Motif
Other DBs
NCBI-GeneID:
127176950
NCBI-ProteinID:
XP_050984754
LinkDB
All DBs
Position
15:complement(38689219..38713899)
Genome browser
AA seq
449 aa
AA seq
DB search
MSTSCRRDPPASPIVTPDPVPSSSPQPAACEIGSTSRRGDARHIHLASEGSARFTLAAVQ
HLARRERVRAVPLRTLPEALRRVVRDRVPTGNFQERLWDVIERLHTRRLSSATPTAFTLS
VEPQRKRIHAAGRWMLQVNDVNEFKHQITFAQPVVFISVCLSVRCYVDDKVSKVAWLNRS
NIIFAGEDKWSLDPRVELVTQGQLEYSLRIQKVDVFDEGPYTCSIQTKQQSKTSQVYLIV
QVPPIIYKVSEDITVNEGSNVTLTCLANGRPDPSITWRLLNPSAEALDVGEYLEISGIVR
SQAGRYECKASNDVSTPDVKYVNVVVNYPPYIKEVRSSETPVGQAGVLHCEASAVPQPEF
EWYRDERRLSSSQSVNIQISGSRTLLVVANVTEDDYGNYTCVATNRLGIHNASVFLYKPG
TGRDINASGCACQSFWLLLLSVLSALLKC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccagctgtcggcgagatccgcccgcgtctccgatcgtaacccctgatcccgtg
ccgagctcctcgccgcagccagcggcctgtgaaataggctccacttcacggcgcggagac
gcgcggcacatccatctggcctccgagggatcggcgcgcttcacgctcgccgcggtacaa
catctggcccgacgcgagcgcgttcgcgccgttccgctccggacgcttcctgaggctcta
cgccgggttgtcagagatcgtgtgccgacgggaaacttccaggagcggctctgggacgtg
attgagcgtttacacactcggcgtttgagctcagcgactcccaccgcctttactctcagt
gttgagcctcagaggaaacggattcatgctgctggtcgttggatgcttcaagttaacgat
gtaaatgagtttaaacatcagatcaccttcgcacaaccagtggtgtttatctccgtctgt
ctctctgtcaggtgttatgtggacgataaggtgtctaaggtggcctggttgaaccgctcg
aacatcatcttcgcgggcgaggacaagtggtccctggacccgcgggtggagctggtgact
cagggtcagctggagtacagtctgaggatacagaaggtggacgtgttcgacgaggggccg
tacacctgctccatccagaccaaacagcagtccaagacgtcacaggtctatctcatcgtt
caagttcctcccatcatctataaagtttcggaagacatcactgtgaacgagggcagtaac
gtgacattgacgtgtttggccaatgggaggccagatccctccatcacctggagactgctc
aacccgtcagccgaggctctggacgtgggcgagtatctggagatctctgggatcgttcgc
tctcaggccggacgttacgagtgtaaagcgagcaatgacgtctccactcctgatgtcaaa
tacgtcaacgtggtggtgaactacccgccgtacattaaggaggtgcggagctccgagacg
ccggtgggtcaggctggagtcctgcactgtgaagcttctgcagttcctcagcctgagttt
gagtggtacagagacgagcgccgactgtccagctctcagagcgtcaacattcagatcagc
ggctcgcgtacgctgctggtggtggcaaacgtcacggaggacgattatggaaactacacg
tgtgtggctaccaacagactgggaatccacaacgccagcgtgttcctctacaaacctggc
acggggcgggacatcaacgcctcgggctgcgcgtgtcaatcattctggctcctcctcctg
tccgttctctcggctcttctgaagtgttaa
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