Labeo rohita (rohu): 127176983
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Entry
127176983 CDS
T09007
Symbol
capns1b
Name
(RefSeq) calpain small subunit 1b
KO
K08583
calpain, small subunit 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127176983 (capns1b)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127176983 (capns1b)
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Motif
Pfam:
EF-hand_6
EF-hand_7
EF-hand_1
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
127176983
NCBI-ProteinID:
XP_050984852
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Position
15:25840845..25846053
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AA seq
214 aa
AA seq
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MFQVGKFLKGLVDVVSNIDQFVPSDPPPPRRPLAYVNQNETDEERQFRRVFQQLAGDDME
VSPNELMGILNKIISKHGDLKTDGFTIESCRSMVAVMDSDSTGKLGFEEFKYLWNNIKRW
QGVYKSFDADHSGMIGSDELPGAFKAAGFPLNDQLFQLITRRYSDEKGNMDFDNYIGCLV
RLDAMCRAFKTLDKDNNGTIKVDIQEWLQLTMYS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagtcggcaaatttctgaaagggctcgtagatgttgtcagcaacatcgatcag
tttgttccatctgaccctcctcctcccagaagaccacttgcatatgtaaaccagaatgaa
acagatgaagagaggcagtttcgcagggtgtttcaacaacttgcaggggatgacatggag
gtgagccctaatgaactgatgggcatccttaacaagattatttccaaacatggcgatctg
aagacagatggtttcactattgagtcctgcagaagcatggtggcagtaatggacagtgac
agtactggaaaactggggtttgaggaattcaagtatctttggaataacatcaagaggtgg
cagggtgtttacaagagttttgatgctgatcactctggtatgattgggtccgatgagcta
cctggagctttcaaagcagcagggttcccactcaatgaccagcttttccagttgatcacc
cggcgatatagtgatgaaaagggcaacatggactttgacaattacatcggatgtcttgtg
cgcctggatgctatgtgtcgtgccttcaagacgcttgataaagacaacaatggcaccatt
aaagtagacattcaagagtggttgcagctgactatgtactcctga
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