Labeo rohita (rohu): 127177073
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Entry
127177073 CDS
T09007
Symbol
nectin3a
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04517
IgSF CAM signaling
lroh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127177073 (nectin3a)
04517 IgSF CAM signaling
127177073 (nectin3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127177073 (nectin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127177073 (nectin3a)
04090 CD molecules [BR:
lroh04090
]
127177073 (nectin3a)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Nectin family
127177073 (nectin3a)
CD molecules [BR:
lroh04090
]
Proteins
127177073 (nectin3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
C2-set_2
I-set
Ig_PVRIG
Izumo-Ig
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
127177073
NCBI-ProteinID:
XP_050985027
LinkDB
All DBs
Position
15:complement(19800722..19845548)
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AA seq
548 aa
AA seq
DB search
MAEEVRHIFGNSTFFNGLLPLMGLLFSVCTGVWANKVVVPEQVTAVLGKNVTLTCRVEVS
TNLSLTQSSWERRLPSGTVTLAVFNPQYGTSIADEYNKRVHFIKPSVHDVSIVLQGVGFA
DIGSYTCKVVTFQLGNMQASTTVDIMVEPKVYVSPGPSSLLDGHGETLVATCTAERGRPA
AKVFWESDLLGRTVNSTHLEPEGTTTTLVQYFWAPTRDAFGRSLSCIVRHPALSKDFRIP
YRLNVSFAPNVMVTAQQDVWYVGQKNVKLDCSASANPPAVSYFWRRLDTTMPAGVDRSNG
SLVFTRPLEPSDSGQYRCEVENNVGLGFKDVHFMVQEPPPTTAAPTTTNTKSILPDTSLT
ITAPINQRAHFTAPTQASPPDSSLGTIVGGAVGGILILVLLMALAGAFYMRQRRTFRGDY
YTKQYIGPSDMQKESQLDVLQPHELQDVYGDDSGNGSQDLKPKPEGDIIYPDYPNDHKDM
DGWEDNLSLQRESTYYSDHHNHHNVNPSGPPLHNGSPYLQDECYDNGTDSDYVSHVDGSV
ISRREWYV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagtaagacacatctttgggaatagcacgtttttcaatggacttctacct
ctcatggggcttctgttcagcgtctgcactggtgtgtgggccaacaaggttgtggttcct
gaacaggtgactgcagtgctggggaaaaatgttactttgacctgcagggtggaggtcagc
acaaacctcagcctgacccagagttcctgggaacgccggctgccctccggcactgtcact
ttagccgtcttcaaccctcagtacgggacctccatagctgacgagtacaacaaacgtgtg
cacttcatcaagccctcagtccacgatgtatccattgtcctgcaaggcgtgggatttgca
gacattgggtcctacacttgcaaagtggtcacctttcaacttggaaacatgcaagcatcc
acaactgtggacattatggtggagccaaaggtctatgtgtctcctggcccctcatctctg
ttggatggtcatggcgaaactctggtggcgacatgtacagctgaaaggggtcgtccagca
gcaaaagtcttctgggaatcagacctcctgggccggacggtgaacagcacacatctggag
cctgaaggcactaccaccactttagtacagtacttctgggcccccacccgggatgcattt
ggccggtccctcagctgcattgttcgtcatccggccctatccaaggatttccgcattccc
tatcggctcaatgtgtcttttgctccaaatgttatggtgacggcccagcaggacgtgtgg
tatgtgggacaaaaaaatgtaaagctggactgtagtgccagtgccaacccacctgctgtt
tcgtacttctggagaagactggacactacaatgcctgcaggtgtggacagatctaatggc
agcctagtgtttactcgtcctttagagccgagcgactctggacaatacaggtgtgaagtt
gagaacaatgttgggctcggctttaaggatgtacacttcatggtacaagagccgccaccg
accactgcagccccaaccaccaccaacaccaagtccatcctgcctgacaccagcttaacc
atcacagctcccatcaaccagcgtgcccacttcaccgccccaactcaggcctctccgccg
gacagcagcctgggcactattgtgggcggtgctgtcggtgggatcctgatcctggtgttg
cttatggctctggcaggggctttctatatgcgccaacggcgaacattcagaggagactac
tacaccaaacagtacatcggcccatccgacatgcagaaagagtcgcaactagacgtcctt
caaccccatgagcttcaagatgtttacggagacgactcgggcaacggcagccaagacttg
aagcccaaacccgaaggagacattatctatcccgattatcctaatgaccacaaagacatg
gatggctgggaagacaatctcagccttcagagagagagcacgtattactccgaccaccac
aaccatcataacgtgaaccccagtgggccaccgctacacaacggctccccttacctgcag
gacgagtgctacgacaacggcacagacagcgactacgtgtctcacgtggatggatctgtg
atttcacgcagggagtggtatgtttga
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