Labeo rohita (rohu): 127177102
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Entry
127177102 CDS
T09007
Symbol
si:ch211-195h23.3
Name
(RefSeq) guanylate-binding protein 1 isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127177102 (si:ch211-195h23.3)
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GFIT
Motif
Pfam:
GBP
GBP_C
FIIND
UPA-FIIND
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
127177102
NCBI-ProteinID:
XP_050985100
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Position
2:31087511..31102372
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AA seq
919 aa
AA seq
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MACGGLMSAPVCLIENDENGKLHVRKEAKNILDGIIQPVVVVSVVGLYRTGKSYLMNRLA
GQQSGFALGSANESKTKGIWMWCIPHPKKEGHTLVLLDTEGLGDVAKGDEKHDTWIFCLA
VLLSSTLVYNSLGTIDNTALENLHYVTELTENICVKADVGQHEDESADFIRVFPSFVWTV
RDFTLELKRGDKLITSDEYLEGALKLKPGISHRIEQYNLPRRCLRQFFAVRKCFVFPRPA
STQNMQRMEQLTEKELDSGFLEQADTFCSYVYDNSEPKTVTGGRTITGTALGNLAEVYVE
AIRSGNVLCVENAVTCLAKIQNVRAVEEALQFYMTEMLSIAELPKRPEELSDIHKTAEKK
AIEVFFSISFNDNGQIYQQELMRKIHDEYQQRCQQNQEASRMQCEDVLRDVFDKMEKSIS
DGSYLKPGGYQQYRDTLTQLTWDYRARTDSQIMREDVLIKYLRAKEEIGIGILQADQSMN
ATERESEVHRLKCDILKKGQRAVEKQKWLHERVFEDMKRSHQEHMRQTTSQMERELERFR
KDNERVLEAKLKERGALLQQNFQQEAARIQDEINSLKADMNKQEMSHHSLQYIDTKWPGA
GLSKLVWTKGAQSDESQFPLQRSEVEKGSDSLSYSSLEAQSPAHPSEDAEVAEVFTPELV
QRGDEDKHDNTYRFVCPHAGQFRCSLTNLVFVMEGEGEVLYNIDSWDPRLLDGLGQMQPA
GPLYNIDCFNGSISGLHFPHCEIFSEENKDILAVAHLTGGNVETMKPLKVTETHVMIYIK
DLSLFGLLKRKIFSSFPVVAQVLLFLRPITTRQRENILDVYLLPWNIPLSKVMGQHKEST
HITTSSKCSLTPGSEYGLCCEPVGSTVQPETEKFECNFGPNYHPTFEVFVNFNTEEIRLS
LLDKTEGKEVWVTRRVVLT
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtggcggactcatgtccgctccggtgtgtctcattgaaaacgatgaaaatggg
aagctgcatgtgaggaaagaggccaaaaatattctggatggaataattcagccggttgtg
gtagtgtctgtggtgggactctaccgtacgggaaagtcttaccttatgaaccgcctggca
ggacaacagtccggctttgctctaggcagcgctaatgaatcaaagaccaaaggcatctgg
atgtggtgcatccctcaccccaaaaaagaaggacacactctggtgctgctggacacagag
ggacttggtgatgtggcaaagggagatgagaaacatgacacatggatcttctgtctggct
gttctactcagcagtactctagtgtacaacagcttagggaccattgacaacacagcattg
gaaaacctgcactacgttacagagctgacggagaacatttgtgtgaaggcagatgtgggt
caacatgaggacgagtcggcagatttcatccgtgtttttccatcgtttgtctggactgtt
cgtgactttactttggaactgaaaaggggggataaactaataacatcagatgagtatctg
gagggtgcactgaaactcaaaccaggtatttcacatcggattgagcagtacaacctgccc
cgtcgttgtctgcggcagttctttgcggtgaggaagtgctttgtgtttcctcggcctgct
agtacacaaaatatgcagagaatggagcagctgactgaaaaagaactggattcggggttc
cttgagcaggcagacacattctgcagttacgtctatgacaattcagagccaaaaacagtc
actggaggccgtacaattactggaacagctctgggtaatcttgctgaggtttatgtagag
gcgatccgcagcgggaatgttctgtgtgtggagaacgcagtcacgtgtctagctaagatc
cagaacgtccgtgcagtagaggaggccctgcagttttacatgactgagatgctcagcata
gctgagcttccaaagcgcccagaagagctgtctgacatccacaaaactgcagagaagaag
gctattgaagttttcttctccatttccttcaatgacaatggccagatctaccagcaagag
ctcatgaggaagattcatgatgaatatcagcagaggtgccagcagaatcaggaagcgtct
cgcatgcagtgtgaggacgtgctgcgtgatgtgtttgataagatggaaaaaagcatttct
gatggatcatacctgaaacctggaggataccaacagtacagagacacactcacacagctg
acctgggactatagagcaagaacagactcacaaataatgagagaggatgtgttgattaaa
tatttgagagcaaaggaagagattggaattggaattctacaagctgatcaatccatgaat
gccacagaacgggagagcgaggtgcatagattaaagtgtgatattttgaagaaggggcaa
agagctgtagagaaacagaagtggttacatgagcgggtgtttgaagacatgaagagatct
catcaggagcatatgcggcagaccactagtcagatggagagagagctggaaagattcagg
aaagacaatgaacgagtcttagaagcaaaactgaaggaaagaggagctcttctacagcag
aactttcagcaggaggctgcacggatacaggatgagattaacagcctgaaagcagatatg
aataaacaggaaatgtcccatcactccttacaatacatcgatactaaatggcctggtgct
gggctttcaaaacttgtctggacaaagggtgcccaatctgatgagtctcaatttccgctg
caacgttcagaggtagaaaagggttctgattctctgtcttactcatcattggaggctcaa
tcaccagcacacccatcagaagatgcagaagttgcagaagtgttcactccggaacttgtt
cagagaggtgatgaagacaagcatgataatacatacaggtttgtgtgtccacatgctggt
cagtttcgttgcagtctgactaaccttgtgtttgtgatggagggtgaaggagaggtgctg
tataacattgactcatgggatcctcgtctgttagatggtttgggtcagatgcagcctgca
ggacccttgtacaatattgactgttttaatggttcaatctcaggactgcactttcctcac
tgtgaaatattctctgaggaaaacaaagacattctggctgtagcacatctcactggtggt
aatgtagaaacaatgaagcctcttaaagtgactgaaactcatgtgatgatttacatcaaa
gatctgtccctctttgggctcttaaaaaggaagatcttttcttcgttccctgttgttgcc
caagtgcttctctttctacgaccaattactacgagacagagagaaaacatactggatgtt
tatttgctcccgtggaacattccactgtccaaggtcatgggccagcacaaagagagtaca
cacattacaaccagttcaaagtgctctctcaccccaggatcagaatacggtctgtgttgt
gaaccagtgggatctacagtacagccagagacagagaagtttgagtgtaattttggtcca
aactatcatcccacatttgaagtgtttgtaaatttcaacactgaggaaatcagactgagt
cttttggataaaactgaaggaaaggaagtatgggttacacgacgagtcgttctcacatga
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