Labeo rohita (rohu): 127177148
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Entry
127177148 CDS
T09007
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127177148
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
DSCAM family
127177148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
Ig_6
V-set_CD47
Receptor_2B4
fn3_2
Sp38
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
127177148
NCBI-ProteinID:
XP_050985173
LinkDB
All DBs
Position
15:complement(13864767..14003663)
Genome browser
AA seq
2159 aa
AA seq
DB search
MTVPRRGGYERRDQSLPRFSALASPGLGLERSPGSIVTTPARSLAWPNTAQCTRRDCKTF
LRNIPAIYGMWLVTLLLLYSFQEVHSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGK
IRSPSIRVKAVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPG
NRFFLTSYGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTETPPSVMDS
FQSGEVQVGRSIELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTISDLRLEDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWFRN
TEPIVPDQHFSIQGAHNETLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVAPGEPFSLMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVN
VTNPQIRDGGVYRCAARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGY
PYYSIKWFKDGTTPLPDNHRQVVYENGTLKLSDVQKGTDEGAYLCSVLIQPQLSISQTVY
VTVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKE
FMSSLQISKVSLQHNGNYTCIASNDAATVSSERQLIVTVPPGFRVQPNNQDGIYGKSEVL
NCSVEGYPPPKVVWKHAKGIGNPQQYHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQA
SNGVGSDISKSMMLTVKIPAMITSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVI
DPDRNPRYSITTSPNEKSDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKSDPWELKHATRKISPTNNQA
NIVELHPASVYSIRMYSYNKIGRSQASKELTISTEEAPPDGPPMDVILQPMTSQSIRVTW
KAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYR
VVFWSLYPDGGGCCGGQTLGLNQKWGEMQNITTTREQVELKGLEKFTNYSIQVLAYTQAG
DGVRSNVLYIQTREDHPGPPAGIKAVPSSATSVVVSWLPPIKPNGIIRKYTIYCSSPGSG
QPAPSEYEANPELLIYRITHLTRGQQYLIWAAAVTTAGRGNISEKVTVEPAGKAPAKILS
FGGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTQDGHRNILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKT
HGREPQFNKDQPLFTHINSTHARLNLQGWTSGGCPITAVLLEFRPKGTWAWQSVRTNASA
DIFLAELREATWYELKMKACNSAGCGNQSSQFATLDYDGSTIPPIKSARGEGDDVKKLFS
IGCPVILVTLGMALLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGP
RLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQSVNPQSFCTGVSVHHPALIQNT
GPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQH
GITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITE
CFISDSSSDQMTTGTNDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRA
NKSEYCNLPLYMKTDPFFRKQAELHDPCPVVPPREASIRSLAARAYHTQGRHMTLDPSKQ
QALTLGHGGLSSLTSSGASGTSGPASSGAAGSSSISSGTATLPQRTLTMPSTSSTSSAPS
GAAAAGAGASASSTGGSGPTPGSSKVGGSRDSLLESSSSGLGRLQKQNAGAYSKSYTLV
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccgcggaggggagggtacgagaggcgggaccaaagtcttccccgcttctcg
gcgctggcgagtccgggactagggctggagagatcgccggggagcatcgtcaccactcct
gcacggagcctcgcctggccgaatactgcacagtgcacacgtcgggattgcaaaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttactcctgctgtattct
tttcaagaagtgcacagcgaggatgtggtctcgacgcggctgtactttgtgaatgcttcc
ctgcagagagtgaccttctccagctcagtgggggtgtccctgccctgtcctgcgggtggc
gccccccatgccgtcctccgctggtacctggccaccggcgacgacatctacgacgtgcca
cacatccgccacgttcacgccaacggcacgctgcagctctaccccttctccccctctgcc
ttcaacagcttcattcatgataatgactacttctgcactgccgagaaccaggccggcaag
atccgcagccctagcatccgtgtcaaagcagtgttcagggaaccttacacggttcgcgtg
gcggaccaaaggtccatgcggggcaacgtggccgtcttcaagtgcctcatcccctctgct
gtgcaggagtacgtcagtgtggtgtcctgggagaaggacactgtctccatcgtcccaggt
aacaggtttttcctgacgtcatatggggccctctacatatctgacgttcagaaagaggac
gccctctctacctaccgctgcatcaccaagcacaaatacagcggagaaaccaggcagagc
aatggggctcgtctctctgtgctggaccccactgaaaccccaccgtctgtgatggacagt
ttccagtcaggagaagtacaagtggggcgaagcatagagttgccctgtatcgcctctggt
taccctaaccccaccatccgctggttgaaagatgggaggccgcttcctgctgactcccgc
tggacacggcgactgactggcctcacaatcagcgacctccgtctggaagactctggaaac
tacatctgtgaagtcaccaacagctttggctccaaagaggtcacaggacaccttaatgtc
atcgagcctctgagagttacattgtcccccaagaacctgaaaacaggcatcagcagcaca
gtgattctgtcttgtgccgttcagggctcgccccacttcaccgtctcctggtttcgcaac
acagaacccatcgtgcctgaccagcacttctccatccagggagcccacaatgagactctc
ttcatcacagcagcccaaaaaagacactcaggggcatatcagtgctttgccacccgcaag
ggtcagaccgcacaggacttctccatcatattgcttgaggacggcaccccacggatcgtc
tcgtctttcagtgagcgcgtagtagcccctggcgagcccttctctctcatgtgtgcggcc
aaaggcgctccaccccccaccatcacctggacgctggacgatgagccggtagcgcgggac
tcggcgcaccgggccagccagtacacgctctccgacggctccactgtctcgcacgtcaac
gtcaccaacccccagatccgcgacgggggcgtgtaccgctgcgccgcacgcaactcggcc
ggtagcgccgagtaccaagcgcgcataaacgtaagaggtcctcccagtatccgggcaatg
cggaacatcacagctgtggctggtcgcaacactttcattaactgtcgtgtgattggctac
ccctattactccatcaagtggtttaaagacgggacaacgccgttgccagacaaccatcgt
caggtggtgtatgagaacggcactctgaagttgagcgatgtgcagaagggtacggatgag
ggggcgtatctgtgcagtgtgctcatccaaccccagctctccatcagccagactgtctat
gtcacagtcaaagttcctcccctcatccagccctttgacttccctcctacctccatcggt
aagctgatgtacatagcttgtgtggtgtcctccggagacatgccaatccggatcacctgg
aggaaggacgggcaggagatcgtgtcaggaacatcaggagtcaccatcgaaaccaaggag
ttcatgagctcccttcagatctccaaagtttcactgcagcacaatggaaactacacctgt
attgccagcaacgatgcagcaactgttagttcagagagacaacttatagtaacagttccc
cctggttttcgggttcagcccaataaccaagatgggatctacggcaagtcagaagttctg
aactgctctgtggaagggtaccctcctcccaaagttgtctggaagcatgccaaaggtata
gggaacccccagcagtaccatccagttccactgacaggtcgcatccagatcctgtccaat
ggttctctgctgatccgccatgttttagaggaagacagaggatactacttgtgtcaggcc
agcaatggagtgggatccgacatcagcaagagcatgatgctcactgttaaaattccagct
atgataacatcccacccaaacactaccatggccataaaggggcagaacaaggagttaaac
tgtaccgcccggggcgagtaccccatcatcatccgctgggagcgaggtgacacagttatt
gaccctgaccgcaaccctcggtactccatcaccaccagccccaacgagaaaagcgatgaa
gttatctccacactgaagctgaagccagcagagcgaggggattccgtctttttctcctgc
cacgccatcaactcatacggcgagggccgagggctcatccagctgacggtgcaagaaccc
cctgaccccccagagctggaggttcgagaggtgaaagatcgcagtatgaacctgaggtgg
acgcagcggtttgacggcaacagcatcatcaccagctacgacatcgagtacaagaacaaa
tccgacccgtgggagctgaaacatgccactcgtaagatctcgcccaccaacaaccaggcc
aacatagtggagctccacccggcgtccgtctacagcattcgcatgtactcctacaacaag
attggacgcagtcaagccagcaaagagctgaccatcagcacagaggaagcacctcctgat
ggaccacccatggatgtgattttacagccaatgacctctcagagtatccgtgtcacctgg
aaggcgcctaagaaagaactccagaatggagtgatccgtggctatcagattggctatagg
gagaatggaccgggcagtaatggacagtacagtatagtggagatgaaagccactggtgat
agcgaggtgtacaccctggataacttgaagaagtttgctcagtacggtgtggtggtccag
gcgttcaaccgagctggaactggaccttccagctccgagatcaatgccacaacacttgaa
gatgttcccagccagccgccccagaatgtacgggccatcacggtgacatcagacgaggcg
gtgatcacgtggtccgagcccccgcgaatgaccctgaacggggttttgaagggctaccgt
gtggtgttctggtccctctaccccgatggaggtgggtgctgtgggggccagacacttggg
ctcaatcagaaatggggagagatgcagaacatcactaccactcgtgagcaggtggagctg
aagggcttggagaagttcacaaactacagcattcaggtcctggcctacacacaggcggga
gatggcgtccgcagcaacgtcctctacatacagacccgagaagatcaccctggccctcca
gcgggcattaaagcagtgccatcctctgccaccagtgtggtggtatcctggcttcccccc
atcaagcccaatggtatcatccgaaaatacacaatttactgttccagccctggatcgggc
caaccggcacccagcgaatacgaagccaaccctgagctgctgatatatagaatcacccac
ctgactcgtggtcagcagtatctgatctgggcagcagccgtcaccactgctggtcgagga
aacatcagcgagaaggtgactgtggagcctgctgggaaagctcctgcaaaaatcctgtct
tttggaggaacggtgaccactccgtggatgaaggaagtccggctgccgtgcagctcagtg
ggagagccaacacccaccatcaaatggaccaaagacagtgaggacaccgccatcccagtc
actcaagatggtcatcggaatattctctcaaatggtaccctggtgctacgctctgtgaaa
gccgaggattctgggtactacacctgcacggccaccaacacgctggggtttgacacaatc
atcgtaaacctgctggtacaagtgcctccagatcaaccacgcttgacagtttccaccacg
tccacttcttcgatcactctggcttggatccctggagacaacggaggaagttccatcaga
ggttttgtgctgcagtattcagtagataacacagaggagtggaaggatgtcttcattagc
tccagcgaacgctctttcaagctggacaacctgcgctgtggtacctggtacaaagtcaaa
cttgcagcaaaaaacagtgtgggagctggtcgcatcagcgagatcattgaggccaagact
cacggcagagagccacagttcaataaggaccagcccctcttcactcacatcaactctacc
cacgcccgcctcaacctgcagggctggacgagtggcggctgccccatcacagctgtccta
ctagagttccgacccaaaggcacctgggcctggcagagcgtgcgcaccaacgcctcggca
gacatcttccttgctgagctgcgtgaggccacttggtatgagctaaagatgaaggcgtgc
aacagcgccgggtgcggaaaccagagctcccagtttgccacgttggattatgatggcagc
actatcccgcctattaagtcagcacgaggggaaggggatgatgttaaaaagcttttctca
atcggctgccctgtcatcctggtcacattgggcatggcactactcttcattatccgcaag
aaacgtaaagaaaaaagactcaagagacttagagatgctaagagcttggctgagatgctt
atcagtagtaagaacaatcgaagttttgacactcctgtgaaaggcccacctcagggaccc
cgactgcacatagatattccccgagtgcaactactcattgaggataaagaaggaatcaaa
cagataggtgaagacaaggccaccatccctgtgacggacactgagttcagccaatcagtg
aaccctcaaagcttctgtacgggtgtgtctgtgcatcaccctgccctcatccagaataca
ggacctttgattgacatgtcagacatcagaccaggcaccaatccagtatcaaggaagagt
gtgaagtctgcgcacagcacgaggaaccgttattccagccagtggactctgactaaatgc
caggcgtccacacctgctcgcaccctcacctcagactggcggacagtgggctcccagcat
ggcattacggtcacagagagtgacagctacagtgccagcctgtcccaggacacagataag
ggacgaaacagcatggtgtccaccgagagtgcgtcttccacgtacgaggagctggctcga
gcgtacgaacacgctaagctggaggagcacctacagcatgccaagtttgagatcaccgag
tgttttatctcggacagctcctctgaccagatgaccaccggcaccaacgataacgcggac
agcatgacctctatgagcacaccatctgaaccgggcatctgtcgcttcactgcctcccca
cccaaaccgcaggactacgaccgcggcaaaaacgtggcagtgcccattccccaccgcgcc
aacaagagtgagtactgtaacctccccctctacatgaagacggaccctttcttccggaaa
caggcggagctgcatgacccctgccctgtggtcccgccccgcgaggcctccatccggagc
cttgccgcccgggcctaccacacacagggccgccacatgacattagacccctccaagcag
caggccctgacactgggccacggcggcctgagcagcctaaccagctcaggggcctctggt
acatcgggcccagcttcaagtggggccgctgggagctccagcatcagctcaggcacggcc
accctgccccagaggactctcaccatgcccagcacctcctccacctcctcggccccaagc
ggggcagccgccgctggagcaggagccagcgcgagctccacgggaggcagcggcccgacg
cccggcagttccaaggtcgggggatccagagactctctgctagagagcagctcatccggc
ctgggcagactgcaaaagcagaatgctggggcgtactccaaatcctacactctggtgtag
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