Labeo rohita (rohu): 127177153
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Entry
127177153 CDS
T09007
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03440
Homologous recombination
lroh04068
FoxO signaling pathway
lroh04110
Cell cycle
lroh04115
p53 signaling pathway
lroh04210
Apoptosis
lroh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127177153 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
127177153 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127177153 (atm)
04210 Apoptosis
127177153 (atm)
04115 p53 signaling pathway
127177153 (atm)
04218 Cellular senescence
127177153 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127177153 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127177153 (atm)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127177153 (atm)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127177153 (atm)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
127177153 (atm)
Protein kinases [BR:
lroh01001
]
Serine/threonine kinases: Other
PIKK family [OT]
127177153 (atm)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
127177153 (atm)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
127177153 (atm)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
Check point factors
Other check point factors
127177153 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
CEP104-like_TOG
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
127177153
NCBI-ProteinID:
XP_050985185
LinkDB
All DBs
Position
15:complement(10249204..10316957)
Genome browser
AA seq
3095 aa
AA seq
DB search
MSLALHELLVCCRGLENEKATERKKEVDRFKRLIRSPDTVEELDRMSGCKGSKQLTWDAV
FRFLQKFLQKETEVIQSGKANVSAITQANRQKKMQEISSLMKYFIRCANQRGPKLKCAEL
ISHVVDVLQSPFSCAAYGEDYSSILLKNILSVRKYWCEMSQQQWHSLLDLYCGLFLNRGS
KSINRVQVSRIIYTVIWGCCVQIEGLSHTLFNFFRKALKKPDGQLMIVENLVSAVNVFLR
SVLLSSRKRVCSLGEEVLSSVVCVYTGMRPSPTLKEELVKFFQLQLCVHHPKGAKTLETG
AYAEDWIRWQSQLSTLYDALVSEISQIGSRGKYAKGTRPIAVKENLIELTADVCHQMFNQ
STHISEVTASFCRDTQRDSPQSCKRRRIEPPLISWEVIRSKLQPHHSDFDMIPWLQVTAA
LISKYPSVLPADDLMPLLGLLCQLQGQQQRRSERGPYVLHCLREVALCHAKNSANCSVHA
AEVGRLWGRVWALALRGVGSAQTEILCLELLRIMVQESLVPVDREFWKVFSGAVCKPSLV
SALCLAQALLKCSIPKSVQSRDINSGVLMETGGEPPTLRESIISWVVMNEQNEETEENSK
PIIITRDFPLNLIPRILVSLTLKDSRAGLAFLMGSLKPESFCPQSSSFAEGKDSLGEIES
LFLQFSFDDTHSNTGAAIDRESVYSENPQFTVIQALKNQLEHSLLSVAEQLFNCYSPDSS
DTLHVCVLRCVSLFSGVLAAYVCIGLITEEQACHSPLFLKAKALVHEFSHYVSTAKSKLA
ENDTITGIQSVMLLCSDSISRREKEDKISTISRNLFMKTLPVRLLNDLCDISKQLLSNSS
KKDNTVMDDPVDEDMDMSRTQMDNQEDIDLFEDGDGTHHSNSRPHQSNEEASDSKCITGT
KSALSEEHLSRQDLAFLSVLGFLSICASSELNGGFSFKPLDTQRKLLKLLDLIDLSQILH
LHMYLSLLKKLPAEVTSLDPEEFDTLLRPLADVCSLYRQDQEVCAAILCSLLPSIHCLGR
IPPVSEQEDEMAHIKGALLKVISGFCILGKSGKCTSTVRVALRQCLLALLEVDPCCKWAE
LTLREEQLPVSAVLSSHLADPHHHVCMLAALSVERLFLKKGLDGSGKMMLPLKNQQTAFE
NIYLKAQEGMSGQKNCPSENLPDETFNRRAVLLKSVSVVMSCSPVCEKQALFALFQSYKE
NGIDEQLIKKVLRGVSQSLGYRDSKSLINSHIYYLVAEWLNQKQSDSSYTLQSFPYTLLD
CSSLEEFYRSSYHVLIPHLVFLNDFDEVKSIGDHLAQDWKQLLANCFPKIMVNILPHFAL
AGQDTQVAQQREKAHRVYDILKNSNCLGKQQIDSLICNNLADIVVELLMTLHETAGAAAD
RSDLQKFTGELDPAPNPPFFSSYVIKATLDYLSKCHSASHKSLVAILSKTPMSIQRILIA
VCQKAAETTNSYERHRILMMYHLFVSLLLREVKDGLGGAWAFVLRDIIYTLIHHINSRSS
QQDEVATRSLSLCCDLLSLVCQTAVRYCDDALESHLQVIVGTLTAQVTDQSAISQQVLSL
LRFLIIENPENSMLRKSIPLLEPFPDRLHFRELRAAQHALKYSSGAFTLRQEIEHFLSVT
SCDSLPLARLEGLKDLKRQLHSHKQQIGQLLKECHADPASCILIKLVLNLLQLCKIAANH
PGGRDILKAAGRCLGELGPVDLSSIALHHGKDQLYARAADLSQKVPFQWIFILNCMDNAL
THHSIAVRQAAGTCLKDILATQYGIEFGEMCKSKRDPLLAYLNPFRSSKRRDTVVSMEVT
SESRHRLDSSDLWLVQPGGHKDWLKNLCIALLDSGGVRNEALLLSRPLCEVNTDFCQRML
PLFVHDILLGDVDGSWRQLLSTHIQSFFSQCCRPSTPSSRPTTPMLSDSGNTIDVGNQCQ
IDKPSLRSMLAVIDYLRQQRRPVAPGSTEYGTVCDSNFWLDLNYLEVAGAAQICSAHFTA
LLYSEIYVDKIRSNMEQSRRSQSRVSRRITFEEGSQTLSISSVNEKSLEDSGISLQDLLI
EVYRCIGEPDSLYGCGGGKLISPLTRIRIYEHEAMWDKALVSYDLHSNLPEVTRQTGIVE
GLQNFGLCGILNTYLHGLEKEGVEWGPELRELRFQAAWRNTQWDCDLPERNEKLTPGINE
SLFNALQALRDKEFSLFEQTLNYARGHEVEESCRGSLEAVSSLYPALCNLQRISELQSVE
ELFSRPVTDSSLNEVYRKWQQHSDLLTDSDFSLVEPVLALRSSIQETLISSETDQDRRNY
LISAYSSHLMELCKLARSAGNTQLAERAVFHMKQHSLVGGGGGSSSSWAWQLEEAQVFWV
KKEHGLALGLLKQMIHKLDDLVCVNPAVVPVYSECLRLCGSWLAESCLESPAVILEKYLE
RAVEAIEDHCGDSNAKLQSQKTQAFFSLARFSDAQYQSIENYMKSSEFENKHALLQKAKE
EVDLMRERKVSNNRYTVKVQRELELDVKALANLQDDRNRFLLKAVENYIQCLELGEEHDT
WVFRLASLWLENADFKTVNDMMKSGVKKIPSYKFLPLMYQLAARMGTKVSSSLTSQDVGF
HHVLNELICQSSLDHPHHTLFIILALVNANKDESFSRSRTSKSSARQPSPLDLERAEVAR
KIIDLVRKKRGKMVKDIEILCNAYITLAYMDASRHKNEKNAIPIPPEQPIMQIKDLDDVV
IPTMDIKVDPSGRYEDLVTVRSFSPKFHLAGGVNLPKIIDCEGSDGKSRRQLVKGQDDLR
QDAVMQQVFHMCSTLLQRNAETRKRKLNIRRYKVVPFSQRSGVLEWCSGTMPIGEFLVDS
QSGAHKRFRPQDWHNMSCRKKMMEAQRLEFDGKLQAFTEVCQNFRPVFRYFCMERFLDPA
VWLERQLAYTRSVATSSIVGYIVGLGDRHIQNILIDKETAELVHIDLGVAFEQGKILPTP
ETVPFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMN
PLKAFYLQQHDEHAEPNATLNPTPGGDEIDAHRKASDSQSFNKVAERVLLRLQEKLKGVE
EGTVLSVGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcgctgcatgagctgctagtgtgctgccgaggacttgaaaatgagaaagcc
acagagagaaagaaagaggtggatcgcttcaagagactcatccgttcgccagacacggtg
gaggaacttgatcgtatgtcaggatgcaaaggctccaagcagctcacctgggatgctgtt
ttccggtttttacagaagtttcttcagaaagagacagaagttatacagtcaggaaaagcc
aacgtttccgccattacgcaagcaaacagacagaaaaagatgcaggaaattagcagcctg
atgaagtacttcatcagatgcgccaaccaacgcggtccaaagttaaagtgtgcagagctg
atttctcatgtggtggacgtcttacagagtccgttcagctgtgcggcatatggcgaggac
tacagcagcattctgctaaagaacatcctgtctgtccgtaaatactggtgtgagatgagc
cagcagcagtggcacagtttgttagatttgtactgtgggctgttcctcaatagggggtcc
aagtcaatcaacagagtgcaagtgagtcgaatcatctacaccgtcatttggggctgttgt
gtccaaatagagggattatcccacactcttttcaacttcttccggaaggctctgaaaaag
ccagatggacagctgatgattgtagagaacctggtatctgctgtgaatgtttttctgcgc
tcagtgcttctgtccagcaggaagagggtgtgtagtctgggtgaggaggttctgtcgtct
gtggtttgtgtttatactgggatgagacccagcccgacgctgaaagaggagctagtgaag
tttttccagctccagctttgtgttcatcaccccaaaggggcaaagactcttgagacaggt
gcttatgcagaagactggatcagatggcagagtcagctcagcaccctctatgatgctctt
gtcagtgagatcagtcagatcggtagcagaggaaaatatgccaaaggcactcgtcctata
gctgtgaaagaaaatctcattgaactgacagctgatgtctgccatcagatgttcaatcaa
agcactcatatttcggaagtgacagcgtctttctgtcgggatactcagcgggatagtcca
caaagctgcaaacgcagacgaattgagccaccactgataagttgggaggtgatacggtcc
aaactgcagccccaccacagcgactttgacatgattccctggttacaggtcacagctgct
ctgatatccaaatacccatctgtcttgcctgctgatgatcttatgcctctgctggggttg
ctatgccagcttcagggtcaacagcagcgccggagcgagagggggccatacgtcctgcac
tgcctgagggaagtggcgctctgccatgccaagaactcagcgaactgctctgttcatgca
gctgaggtgggccgtctatggggcagagtttgggctctggctctgcgtggagttggctca
gcccaaactgagattttgtgtctggagctgttgcgtatcatggtgcaagaatctctggtg
cctgttgatagggagttctggaaggtcttctctggtgctgtttgcaagccctctcttgtt
agtgccctctgcttggcccaggccttgttgaagtgctccatccctaaaagtgttcaaagt
cgagatatcaacagtggagtgctgatggagacgggtggagagccgcccactctgagagaa
tcgatcatcagctgggtggtcatgaacgagcagaatgaggagacagaagagaacagcaaa
cctatcattatcaccagagattttccactgaacctcattcctagaattttggtgtctttg
acactgaaagacagcagggcaggactggcgtttctgatgggcagcctaaagccagagagt
ttctgtccacagagttcttccttcgctgaggggaaagacagtttgggggagattgagagt
ctctttcttcagttcagttttgatgacacgcattccaatactggtgctgcaattgacaga
gagagtgtttactcagagaatccacagttcactgttattcaagctctcaaaaaccaatta
gagcacagtctcctgtctgttgctgagcagctgtttaactgctactctcctgatagttca
gacactctccatgtgtgtgtgttgcgctgtgtttccctgttcagtggagttctggctgct
tatgtgtgtatcgggctcatcacagaagaacaggcctgtcactcgcccctcttcctaaaa
gccaaggcattggttcatgaatttagtcattatgtatcaacggcaaagagcaaactagct
gagaatgataccatcacaggaattcagtcagtgatgctgttgtgctctgatagtattagc
agaagagaaaaggaggacaaaatttccaccatttctcgcaatttattcatgaagactttg
cctgtgaggttgctaaatgacctgtgtgacatatctaaacaattgttaagcaactcaagc
aaaaaggacaacacagtcatggacgacccagtggatgaagatatggatatgagtagaacc
caaatggacaatcaggaggatattgatctgtttgaagatggagatgggacacaccacagc
aattccagacctcaccagtctaatgaagaagcgagtgattcaaaatgcataacagggacc
aagagtgcattatctgaggaacatttatccagacaagacttggccttcctgtctgtgctt
ggttttctgtcaatatgtgcatcttcagaactcaacggtggattctccttcaaacctctg
gacacccaacgcaaattgctcaaactattggacctcatagacttatctcagatacttcac
cttcacatgtatctttcattgctgaagaaactcccagcagaagtcacatctctggatcct
gaagaatttgatactcttctcaggcctctggcagatgtttgttctctatatcggcaagac
caggaggtgtgtgctgccatcctgtgctctcttctgccgtccatccactgtctgggccgc
attccacctgtgagcgagcaggaagatgagatggcacatatcaaaggagctctgcttaaa
gtcatatcaggattctgcatcttgggtaaatctggcaaatgtacttcaactgtgagggtt
gcactaaggcagtgtttactggctttgctggaggtggacccatgctgtaagtgggcggag
ctaacactgagggaagaacagctgccagtgtctgcggttctctcctctcatttagcagat
ccccatcaccatgtgtgcatgctggcagctctatctgtggagagattgttccttaaaaaa
ggactggacgggagtgggaagatgatgcttcctctaaagaaccagcagactgcctttgag
aatatttacctcaaggctcaggaaggaatgagtgggcagaaaaactgtccttcagaaaac
ttacctgacgagacatttaatcgacgggcagtcttgctgaaaagtgtctccgtggtgatg
tcctgcagccctgtgtgtgagaagcaagccctgtttgcactttttcaatcctacaaggag
aatggcatagatgaacagctaatcaaaaaggtgctgagaggtgtttcccagtctcttggg
tacagggactctaagagtttaattaattcacacatatattatctagtggccgagtggctg
aaccaaaaacagtctgattcaagttacacactgcagtccttcccctacacactgctggac
tgctccagtctggaagagttttacaggtcatcgtaccatgtgctgatcccacacctggtc
ttcctgaatgattttgacgaagtgaaatccattggtgatcacttggctcaggactggaag
cagctgctggctaattgctttcccaagatcatggtcaacatcctgccccacttcgctctc
gctgggcaagacacccaagtggcccagcagagagagaaagctcacagggtatatgatata
ctgaaaaacagcaactgcctgggaaaacagcaaattgacagtttgatttgcaacaacctg
gctgacattgtggtggagctgttaatgacactgcatgagacagcaggagcggcagcagat
agaagcgacctacagaaatttactggagagttggatcctgcaccaaacccaccattcttc
agctcatatgtcatcaaagccacgctggactacctgagcaaatgccacagtgccagtcac
aagtctctggttgccatcctgtccaagacaccaatgtccattcagaggattctaatagca
gtctgtcagaaggctgctgagaccaccaacagctacgagaggcatcgcatactgatgatg
taccacctgtttgtcagcctgctgctcagggaggtgaaggatgggctgggcggagcctgg
gcatttgtgctgcgtgacatcatctatacactcattcaccacatcaacagcagatcatct
cagcaggatgaggtggccactcggagtctctccctgtgttgtgacttgctgtcgctggtc
tgtcagacagctgtgcgatactgtgacgatgctctagagagccacctgcaggttattgtt
ggtactctcacagcacaggtcactgaccagtctgccatatctcagcaggtcctcagtcta
ctaagattcctgataattgaaaacccggagaacagtatgttgagaaagtccataccactt
ttggagccttttccggaccgattgcactttagagagctgagagccgcccaacatgctctc
aaatacagctcaggagccttcactctcagacaggaaattgagcattttctgtctgtaacg
tcttgtgattctttgcccttggcccgtctggagggattgaaagatctaaaaaggcaactt
cacagccataaacagcagataggacaactcttgaaagaatgccatgctgatcctgccagc
tgtattttgattaagctggttctaaaccttcttcagctttgcaaaatcgcagctaatcac
cctggtggaagagacatcttgaaggctgctggccgatgcctaggagaacttgggccagtt
gacttatcatccattgccttgcaccatgggaaagaccagctgtatgctagagcagccgat
ttgtcccaaaaagttccttttcagtggatcttcatcctgaactgcatggacaatgcactc
acacatcacagcattgcagtgcgtcaggctgcaggaacttgtctaaaggacatcttggcc
actcagtatgggattgaattcggagagatgtgtaaaagtaaaagggaccctttattggca
tacctaaacccctttcgctcttccaagagacgggacactgttgtgagcatggaagtaacc
tcagagtccagacataggctggacagttctgacctctggttagtgcagcctggtggacac
aaggactggttaaagaacctgtgtattgccctgttagacagtggaggtgtccgaaatgag
gctctgcttctctccagacctttatgcgaggtcaatacagatttctgtcagaggatgctg
ccactctttgttcatgatatacttctgggagacgtggatggttcatggaggcagctgtta
tccacacacatacagagtttcttcagtcagtgctgtagaccctccacccccagcagccgc
cccacaacccccatgctctctgattcagggaacactattgatgttggcaaccaatgccag
atagacaagccctcactccgcagcatgctggcagtcatagactatctcaggcaacagaga
cgcccagtggcacctggaagtactgaatatgggacggtgtgtgattcaaatttttggctg
gatctgaattatctggaggtggctggagccgcccagatttgttctgcccatttcactgct
cttctgtactctgagatctacgtggacaagatcagatccaacatggagcagagccgaagg
tcacagtctcgagtgtcgagacggatcacgtttgaggagggtagccagacactgtccatc
agtagcgtgaatgaaaagagtttagaagactctggcatcagtcttcaggatctcctgatt
gaagtgtacagatgcattggagaacccgacagcctgtatggatgtggaggaggcaagtta
atcagtcctttgactagaattcgaatatatgaacatgaggccatgtgggacaaggctttg
gtttcatatgacctccactccaacctgccagaggtcacgcggcagaccggcatagtagag
ggtctgcagaactttggtttgtgtggtattctaaacacgtatctacatgggctggaaaaa
gagggggtggagtggggtcctgaacttagagagctacgatttcaggcagcttggaggaac
acacagtgggactgtgacctgcctgagagaaatgagaagctgacgcctggcatcaatgag
tccttgttcaatgccctccaagctttgagagataaagaattctccctgtttgagcaaacc
ctcaactatgctagaggtcatgaggttgaggagtcgtgtcgtggtagtctggaggccgtg
tcttcactctatcctgctctctgtaacctgcagaggattagtgaactccaaagtgtcgag
gagcttttctccaggcctgtaactgactccagccttaatgaagtgtacaggaagtggcaa
cagcactcagatctcttaaccgacagtgatttcagtctggtcgagcctgtcttagccctg
cgctcctccatacaggaaacactgatttcctcagagacagaccaagatcgaaggaactac
ctgatttctgcctattcctcccacctgatggagctatgtaaactggctcggtctgcaggc
aacacacagctggcagagcgagcagttttccacatgaagcagcacagcctggtaggtggt
ggtggtggcagcagcagctcgtgggcctggcagctggaggaggcgcaggtgttctgggtg
aagaaggaacacgggctggctctggggctgctcaaacagatgatccataaactagatgat
ctggtgtgtgtgaaccctgctgtggtgccggtgtattctgagtgtttgagactgtgtgga
agctggctggctgaatcctgtctggagagccctgctgtcatactggagaaatatctggag
agggctgtggaggccattgaggaccactgtggcgattcaaatgctaaacttcagagccag
aagacccaggctttcttttcgcttgcccgtttctctgatgcacagtaccagagcattgaa
aactacatgaagtcatcagagtttgagaataagcacgctcttttgcaaaaggccaaggag
gaagttgatcttatgcgggagaggaaggtcagcaacaacagatacacagtgaaagttcag
agggaactagagctggacgtcaaggcactagctaacctacaggacgaccgcaaccgcttc
ctcctcaaagctgtggagaactacattcagtgcctggaactgggagaggagcatgacacc
tgggtcttcagattggcctccctttggctggagaatgctgatttcaaaaccgtaaatgac
atgatgaagagtggtgtaaagaaaatcccatcatataagttcctgcccctgatgtatcag
ttagctgctcgaatgggcaccaaagtgtccagctccttgacctcacaggacgtcggcttc
catcatgttctgaatgagttgatctgtcagtcatcgcttgaccacccccaccacactctc
ttcatcattttggcactggtcaacgccaacaaggatgagagtttctctcgcagtcgtacg
tccaagagcagcgcacgccaaccttcacctctggacctggaacgggcggaagtcgctcgt
aagattattgacttggttcgtaaaaagagaggcaagatggtcaaagacattgagatcctt
tgcaatgcctacatcactttggcgtacatggatgccagtcgccataaaaatgaaaagaat
gccatacctattccacctgaacaacccattatgcaaatcaaagatctcgatgatgttgtt
attcctaccatggacatcaaggtggatccatcaggcagatatgaagaccttgtgactgtc
aggtcattcagtcctaaatttcacctggctggaggcgtcaacctacccaaaataattgac
tgtgagggttcagacggcaagagcaggagacagctagtcaagggtcaggacgatctgagg
caggatgcagtcatgcagcaggtctttcatatgtgctccaccctcctgcagcgcaatgca
gaaactcgcaaaaggaaactcaacatccgccgttacaaagtggtgccgttttcccagcgc
agtggtgttttggagtggtgttctggtactatgcccattggagagtttctggttgattca
cagagtggggcgcacaaacgcttccgcccacaagactggcacaacatgtcctgtcgcaag
aaaatgatggaggctcagcggctggaatttgatggcaaactccaggctttcactgaagtg
tgccagaacttccggccagtattccgatacttctgcatggagcgcttcctggaccccgcg
gtgtggctggagagacagctagcatacactcgcagtgtggccacctcttctattgttggt
tacatcgttggcctgggtgatcggcatattcagaacatacttattgataaagagacggca
gaactggtccacatagacctgggcgttgcatttgagcagggtaaaatcctacccacccct
gagacagttcccttcagactgtctcgagacattgtggatggcatgggcatcacaggggtg
gagggtgtcttcaggagatgttgtgagaaaacaatggaagttatgaggagttctcaagaa
gccctactgaccattgtggaggtgttgctgtatgaccctctgtttgattggaccatgaac
cctctgaaggctttctatctgcaacagcatgacgagcatgcagagcccaatgccacactc
aaccccacgccaggtggagacgagatcgatgcccaccgcaaggccagtgacagtcagagc
tttaataaagtggcagagcgtgtgttgctcagactgcaggagaagctgaagggtgttgag
gaggggacggtgctcagcgtgggcgggcaggtaaacctcctcattcagcaggcaatggac
cccaaaaacctcagccgcctcttccccggctggcaggcctgggtctga
DBGET
integrated database retrieval system
