Labeo rohita (rohu): 127177160 Help Entry 127177160         CDS       T09007                                  Name (RefSeq) protein Atg16l2   KO K20868   autophagy-related protein 16-2 Organism lroh  Labeo rohita (rohu) Pathway lroh04140   Autophagy - animal lroh04145   Phagocytosis Brite KEGG Orthology (KO) [BR:lroh00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     127177160    04140 Autophagy - animal     127177160  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lroh04131]     127177160    03029 Mitochondrial biogenesis [BR:lroh03029]     127177160 Membrane trafficking [BR:lroh04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     127177160  Others   Specific organelles associated proteins    Auto phagosome     127177160 Mitochondrial biogenesis [BR:lroh03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     127177160 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd EIF3I WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th ANAPC4_WD40 ATG16 Beta-prop_TEP1_C CFAP251_N Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_NWD2_C Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_ACSF4 NBCH_WD40 PAC11 Ge1_WD40 Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_HPS5 PALB2_WD40 Beta-prop_Vps41 Mcf1_ABD Motif Other DBs NCBI-GeneID:  127177160 NCBI-ProteinID:  XP_050985208 LinkDB All DBs Position 15:complement(9700915..9752768) Genome browser AA seq 588 aa AA seqDB search MIMAASQSARNSELNQNETWKRHIIRQLKYRNRTQTSVFQDIIESYHSLLEKSKQRALIT KGILGSGSRPSQSEDSLTSLKTTTGELAYQVVELQQKIQIKEVTLDEQHTKLYDVQNHLS VLSSEHSALQNHVAEVQAKNQLLKNQYDSLLEQHQNMERTYRQEKLRSSEILENMIRPKQ QAAVRMNHRNEKRVRAREASLHKELQMAASKNVNINEESGNISPPNPSSPQSESQRLERS HGPLYRSASATSPRIISSIRGLFERKIRGKSVCRSEEDLYIPLGVCLVARVPTKAIFTLD AHELGINAVRFSTSSNLLATGGTDRVIKLWDIEAGTLQNRGTLDGSNEGITSIEFDPTGT RILAASYDKSALFWRLEDSVPKVTLTGHSRKVTAAKFKYSQRQVVTGSADRTVKIWDLQR AACIQTIEVLSFCSDVVCSEYLIISSHYDRKIRFWDSRAGTCTQEVPLQGRVTSLDLCPN HRQLLSCSRDDILQLVDLRKSNDRVAFRAEGFKCGSDSTKAIFSPDGSFLAAGSADGAVY IWNVNTGNLEKQLPDMHRASISAVAWSLSGEYVVSVDKSRRAVLWSDI NT seq 1767 nt NT seq  +upstreamnt  +downstreamnt atgatcatggcggcgtcgcaaagcgcgagaaactctgaacttaatcagaacgaaacatgg aagcgtcatattatcagacagctgaaatatcgcaacaggacacagacgagcgtcttccag gatattatagagtcatatcacagtctgctggaaaagtccaagcaaagagccctcataacc aaaggcattctgggatcagggtcaaggccctcacaatctgaagattcactgacgtctcta aagacaaccaccggtgagcttgcataccaagtggtggaactgcagcagaaaatccagata aaggaagtgacactggatgaacaacataccaagctgtacgatgtccaaaaccatctcagt gttctgtcgtcagagcacagcgcacttcagaaccatgtggcagaggtacaggctaagaac caactcctgaaaaaccaatatgattctctactggagcagcaccagaacatggagaggacg taccgacaagagaaacttcgcagctcagagatcctggagaacatgattcgtccaaaacag caggctgctgtccgcatgaaccatcgcaatgagaagagagtgagagccagagaggccagt cttcacaaagagcttcagatggccgccagtaagaatgtgaatattaatgaagaatctgga aatatatcacctcccaatccatcatctcctcaaagtgagtcacaaaggttagagagatcc cacggaccactttacaggtctgcttcagctacgtccccccgcatcatcagctccatcaga ggacttttcgagaggaagattagaggtaaatccgtttgcagatcagaggaagatctctac ataccattaggagtctgtctggttgccagagtcccaaccaaggcaatttttacattggat gctcatgagctgggaatcaatgctgtgaggttcagtaccagttcaaacctgctggctaca ggaggaactgacagggtcattaaactgtgggacattgaagcaggaactcttcagaacaga gggacgttagacggaagtaatgaagggatcaccagcattgagtttgaccctacgggcact cggattttagctgcgtcatatgacaagtcggctctattttggaggctagaggacagcgtt cccaaggttacattgacaggtcattctcgtaaagtgacagcagccaaatttaaatacagt cagaggcaggtggtcacgggcagtgcagacaggaccgtgaagatatgggacctccagcga gcagcgtgcatacaaaccattgaggttttgtctttctgtagtgatgttgtgtgctccgaa taccttatcatcagcagccattatgacagaaaaatacggttttgggacagcagggcagga acctgcacacaggaagtgcctcttcagggcagagtgacatcattggacctctgccccaac cacaggcagctgctcagctgctccagggatgacatcctgcagctggttgacctgagaaag agtaacgacagagtggccttcagagcggagggcttcaaatgtggaagtgacagcaccaag gccatcttcagtccggatggcagtttcctggcagctggctctgcagacggtgccgtctac atatggaatgtgaacacaggaaacttggaaaaacagcttcctgacatgcacagagcttca ataagcgctgtggcctggtcgttgtcgggtgaatacgtggtaagcgtggacaagagccgt cgagctgtgctctggagtgatatctga

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