Labeo rohita (rohu): 127177184
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Entry
127177184 CDS
T09007
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127177184 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127177184 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127177184 (srsf1a)
Spliceosome [BR:
lroh03041
]
Common components
Common spliceosomal components
SR proteins
127177184 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
GRP
Motif
Other DBs
NCBI-GeneID:
127177184
NCBI-ProteinID:
XP_050985252
LinkDB
All DBs
Position
15:19284479..19288787
Genome browser
AA seq
254 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGGGGGAPRGRYGP
PSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRK
LDNTKFRSHEGETAYIRVRVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSRGS
PQYSPRHSRSRSRS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtgtgattcgcggccctgctggaaacaacgactgccgcatttatgtgggg
aatctgcctcctgatatccgcactaaagatgtcgaagatgtgttttataagtacggagcc
attcgagacatcgatctgaaaaaccgacgaggcggacctccattcgcctttgtcgagttt
gaagaccccagagatgccgaagatgctgtttatgcccgtgatggctatgactatgatggc
tatcgccttcgagttgagtttcccaggagcggaagaggaggttttggaggtggtggcggc
ggcggaggaggaggaggaggaggtggtggtggtggggctcctaggggtagatacggaccc
ccatccagacgttcggagtatagagtaattgtttcagggcttccaccaagcgggagctgg
caggatctaaaggatcacatgcgtgaagcaggtgatgtatgttacgctgacgttttccga
gacggaactggtgtggtggagtttgttcgcaaagaagacatgacctacgccgttcgcaaa
ctggataacacaaagttccgctcgcatgagggagaaacggcgtacatccgtgtgagggtg
gacggtccccgcagtccgagctacggaagatcaaggtcaaggagccgcagtcgcagcagg
agtcgcagccgcagcaacaaccgtagccgaagctactccccgcgccgcagccgtggatcc
ccgcagtactccccgcgccatagccgttcccgctctcgctcctaa
DBGET
integrated database retrieval system
