Labeo rohita (rohu): 127177278
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Entry
127177278 CDS
T09007
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127177278 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127177278 (cadm1b)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Nectin family
127177278 (cadm1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
FAS_meander
Mid2
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
127177278
NCBI-ProteinID:
XP_050985435
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Position
15:complement(17450035..17695472)
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AA seq
420 aa
AA seq
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MAISGLGSHSISLFCYVIFATFLHKGAAQTISVQGQNLVTNNVSVVEGETAIISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELLVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGNPILESREEIVSEGNETEITCTAMGSKPASTIKWMKGDQPLQGE
ATVEELYDRMFTVTSRLRLTVSKEDDGVAVICIIDHPAVKDFQAQKYLEVQYKPEVQIVV
EFPEGLTREGENLELTCKAKGKPQPHQINWLKVDDDFPSHAVITGSDLFIENLNKSYNGT
YRCVASNLVGEAYDDYILYVYDVLTTTPPPTTTTINAFQDSRADGAPQKIDHAVIGGIVA
VVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNSDDKKEYYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctcgggactcggatctcactctatttcactcttttgctacgtgattttcgca
acgtttctgcataaaggagccgctcagaccatatcagtgcagggtcagaacctggtgacg
aataatgtctcagtcgtcgagggcgagacggccatcatcagctgccgggtgaaaaacaac
gacgactccgtcatccagctgctcaaccctaaccgacagaccatctacttcagagacgtt
agacccttgaaggacagtcggtttcagctggttaacttctcagacaacgagctgctggtg
tcgttgtccaacgtgtcgctgtcggacgaggggcgttacgtgtgccagctctacacggat
cccccgcaagaagcctacgcagacatcactgtgctggttccaccaggcaacccaatctta
gagtcccgcgaggaaatcgtgagcgaggggaatgagacggagataacctgcaccgccatg
ggcagcaaacctgcttccaccatcaaatggatgaaaggagaccaaccactgcaaggtgag
gcgactgtcgaggagttatacgacaggatgttcactgtcaccagccggctcaggctcacc
gtctctaaggaggacgatggagtggccgtcatctgcatcattgaccacccagccgtgaag
gacttccaggcccagaaatacctggaagtgcagtataaaccagaggtgcagattgtggtg
gaattccctgagggtttgaccagggaaggggaaaatctcgagctgacatgcaaagctaaa
ggaaaaccgcagcctcatcaaattaactggctcaaagtggatgatgatttcccctcccac
gccgtgattactggctctgatctcttcatcgaaaaccttaacaagtcctacaacggaaca
taccgctgtgtggcatctaacttagtgggagaagcctatgatgattacatcctttatgta
tatgatgttctcaccacaacccccccacccaccactaccaccatcaacgctttccaagat
tcaagagcagatggagcgccacagaaaatcgatcacgccgtcatcggcggaatcgtcgcg
gtggttgtgtttgccatgctttgtctcctgattgttctcggacgatattttgcaagacac
aaaggtacctactttacccacgaagccaaaggagcggacgacgccgcggatgccgacact
gccatcatcaacgcagagggtggacacaacaattcggatgacaagaaggagtactacatt
taa
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