Labeo rohita (rohu): 127177289
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Entry
127177289 CDS
T09007
Symbol
vtna
Name
(RefSeq) vitronectin a
KO
K06251
vitronectin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127177289 (vtna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127177289 (vtna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127177289 (vtna)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127177289 (vtna)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127177289 (vtna)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127177289 (vtna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
127177289
NCBI-ProteinID:
XP_050985452
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All DBs
Position
15:25130166..25135653
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AA seq
520 aa
AA seq
DB search
MRFFLLLGLIAFTYAAEESCIERCENGFDATKSCQCDSMCAYYKSCCKDYESLCRIMTRG
DTFPSSPEDDYDEQANSTEVPIRSRSQRIMLTPSPASFAETLLNDNPAPEIATAASQTTH
FRLASTIKNPTTTPHTTSIPKPTPTKAKDPDAEVCSGRPFDSFMQLKNGSIYAFRGQYFF
ELDEKSVLPGYPKLIEDVWGIKGPIDAAFTRINCQGKTYIFKGKKYWRFEDGVLDEDFPR
EISVGFEKIPDNLDAAFAIPAHSHHGKEKVYFFKGDQYYQYEFKHQPSHEECIQMSLRSP
STLFRRYTDIYYDRWFEHFNQLFDGAHSHHGGHHFIDKDWTGIKSPVDAVLAGRLYITPR
WPSRRRQDRNRQDWDQQWGQQYGQQWNQRYRQQWDQQRGSRRRQNRSPYWETMAERGISI
GQEFAQRFGQDRWRDQDRRRDYYNRQNDYDYDYRYRPSEDIAYDILRRRQPLQSVYFFKG
DMYYRVNLRTKRVDYANPPYPRPIGKYWLGCKDKPGAEKR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttttctgctgcttggactaattgctttcacatatgcagctgaagagtcatgt
attgaacgctgtgaaaatgggtttgacgccaccaagagctgccagtgtgattctatgtgc
gcatactacaagagctgttgcaaggactatgaatccttatgtcgtattatgactcgtgga
gacacctttccttcttcccccgaggatgattatgatgagcaagcaaacagcacagaggtg
ccaatcagatccagatcacagcgcataatgttgaccccatctccagcaagctttgctgaa
acattattaaatgataacccagcacctgagattgccactgctgcctctcaaactacacat
ttcagattagcctccaccattaagaacccaaccacaactccacacacaacctcaattcct
aaacccacaccaacaaaagccaaagaccctgatgctgaggtctgcagcggcagacccttt
gactcattcatgcagctaaaaaacggctctatatacgcattcagaggacaatattttttt
gagcttgatgagaaatcagtattaccaggatacccaaagctcatcgaagacgtctgggga
ataaaaggcccaatagatgctgctttcactcgcataaactgccaaggaaagacgtacatc
ttcaaaggtaagaaatactggaggtttgaagatggagtactagacgaagatttcccacga
gaaatatctgtgggatttgagaagataccagacaatctggatgctgcctttgccattcct
gctcacagccatcatggcaaagagaaggtttatttttttaaaggagaccagtattaccag
tacgagttcaagcaccagccatcccatgaggagtgcattcagatgtcattaagatctccc
tcaacactcttccgcagatacactgatatttactacgaccgatggtttgagcacttcaac
cagctctttgatggagctcacagtcatcacggtggccatcacttcatcgacaaagactgg
actggcatcaagtctcctgtggatgctgtgctagctggtagactctatatcactccgaga
tggcccagcagaagacgtcaggacaggaatcggcaggattgggaccagcagtgggggcaa
caatatgggcagcagtggaaccagcgttataggcagcagtgggaccagcagcggggctcc
aggcgtagacagaataggtcaccttattgggagactatggctgaaaggggcatcagcatt
ggacaggagtttgctcagaggtttggacaggacaggtggcgagaccaggacagacgcaga
gactattacaacagacaaaatgactatgattatgactacaggtacagaccttctgaagac
atcgcctacgacatactgcgcaggaggcagcctttacagagtgtctacttcttcaaagga
gatatgtactacagagtgaatctccgaaccaagcgggttgactatgcaaaccctccatat
ccaagacctattggaaaatactggcttggctgcaaagacaagccaggagcagaaaagaga
tga
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