Labeo rohita (rohu): 127177410
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Entry
127177410 CDS
T09007
Symbol
cnga1a
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127177410 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127177410 (cnga1a)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127177410 (cnga1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
CDC45
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
127177410
NCBI-ProteinID:
XP_050986022
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All DBs
Position
1:complement(22161125..22166950)
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AA seq
736 aa
AA seq
DB search
MTVVPASGGIAIPPQMSPIMEVDTEEDSEDPIPAPSAGRKFNINNSNNNEERQEEXEKEK
KEKKEKKEKKEKKEKKEEKEKKKQKDEKEKENEKEKEKEKEKEKEKEKEKEKEKEKEKEK
QKEKKEGPKEVFVINPAGLLYYQWLLIITIPVMYNWTAIIARACFEELQHEYLLIWFLLD
YTSDLLYLADMAFRARTGYLEQGLLVKDEKLLLQRYKESFQFRIDVISMLPTDIFYLVLG
LDYPEIRINKLLRLNRMFEFFTISETMTNYPNIFRICTLIMYILIIIHWNACLYFSFSKS
IGFGSDAWVYPDLEEDEFGELMRKYSFSLYWSTLTLTTIGETPSPELDSEFLFHVVDFLV
GVLIFATIVGNIATMISNMNAAQAQFQARIDNIKQYMHARHVSKDLEIRVIKWFDYLWTN
QKAQDEREVLRYLPDKLRAEIGMNVHLDTLKKVRIFADCEAGLLIELVLKLRPQVFSPGD
YICRKGDIGREMYIIKDGKLAVVADDGVTQFVVLGDGSYFGEISILNIKGSKAGNRRTAN
IRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEDKGRQILLKDGLLELDPAKLKPDERDLE
DRVNRIYSTMQIMQTKVKKLLAEQEETQKDIRRRIVQIERFAGEEVEDEDEEEEKEKTEE
TEEEKKEEEAEKEMLEEDKEKTEEKEEEKVEEATEEEKKEEEAEKEMLEEDKEKTEEKEE
EKVEEATEEEKKDGES
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgtacctgcatcagggggtattgcaatcccaccccaaatgtctccgataatg
gaagtggacacagaggaggacagtgaagacccaattccagctccaagtgcaggacgtaaa
tttaacatcaacaacagcaacaacaatgaagaaagacaagaagaataagaaaaggagaaa
aaagaaaagaaggagaagaaagagaaaaaagaaaagaaagaaaaaaaagaagaaaaagag
aagaagaaacaaaaggatgaaaaagagaaagaaaatgagaaagaaaaggaaaaggaaaag
gaaaaagagaaagaaaaagaaaaagaaaaggaaaaggaaaaagaaaaagaaaaggagaag
caaaaagagaaaaaggaggggcctaaggaggtgtttgtgattaacccagcgggacttctg
tactatcaatggctgcttataatcacaattcctgtcatgtacaattggacagctataatt
gcaagagcctgctttgaggagctgcagcatgaatatctcctgatatggttcctcctggac
tacacctctgacctgctttatttggctgacatggccttcagagcacgaacaggttacctg
gaacagggcttactcgtcaaagacgaaaagctccttcttcagcgatacaaagaaagcttc
cagttccgcatcgacgtcatctctatgctacccacggacatcttctacttagttttaggg
ttagactacccagagatccgcataaacaagttgctccgcctgaaccgcatgtttgagttc
ttcacgatctcagaaaccatgaccaactaccccaacatcttcagaatctgcactttgatc
atgtatatcctcatcatcatccactggaacgcatgcctctacttctccttctccaagtcc
attgggttcggctcagatgcgtgggtgtatcccgatctcgaagaagatgagtttggagag
ctgatgcgaaaatattccttcagcctctactggtccactcttaccctcaccaccatcgga
gagacgccgtctcccgagctagactctgaattcctctttcacgtggttgacttcctggtg
ggtgtcttgatctttgccaccatcgtgggtaacattgcaacaatgatctcaaatatgaat
gcggcccaggctcagttccaagccaggattgacaacatcaagcagtacatgcatgcacgt
catgtcagcaaggatcttgagatacgtgtcatcaagtggtttgactatctgtggaccaac
caaaaagcacaagatgaacgagaggtgctgaggtacttgccagacaagttacgggcggag
ataggcatgaacgtgcacttagataccctcaagaaggtgcggatctttgcagactgtgaa
gcaggactgctgatcgagttggtgttgaagcttcgccctcaagtcttcagtcccggtgac
tacatctgtcgcaagggcgatattggccgggagatgtacatcataaaggatggcaaactt
gctgtggtggctgacgatggcgtcactcagtttgtcgtccttggcgatggaagctacttt
ggagaaatcagcattctaaacattaagggaagcaaggccggaaaccgtagaacggccaac
attcgaagcataggatactcagacctcttctgtctgtccaaagatgatctgatggaggct
ctgactgaatatcctgatgctaaggctatgctggaggacaaagggagacagattctgctg
aaggatggtctgctagagctggaccctgcaaaactcaagccagatgagagggacttggag
gaccgtgtaaaccgaatatatagcacaatgcagatcatgcagaccaaggtgaagaagctg
ctggctgaacaggaggagacgcaaaaggatatcagaaggcggattgttcagatagagcgc
tttgctggggaggaggtggaagatgaagatgaagaggaagagaaggagaagactgaagaa
acagaagaggaaaagaaagaggaagaggcagagaaagagatgttagaagaagacaaggaa
aagacggaagaaaaagaggaggaaaaagtggaggaagcgactgaagaggaaaagaaagag
gaagaggcagagaaagagatgttagaagaagacaaggaaaagacggaagaaaaagaggag
gaaaaggtggaggaagcgactgaagaggaaaagaaagatggggagtcatag
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