Labeo rohita (rohu): 127177480
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Entry
127177480 CDS
T09007
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 8
KO
K08623
a disintegrin and metalloproteinase with thrombospondin motifs 8 [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127177480
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127177480
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
TSP1_ADAMTS
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
Pep_M12B_propep
ADAMTS_CR_3
TSP1_spondin
Reprolysin_2
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
127177480
NCBI-ProteinID:
XP_050985728
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All DBs
Position
15:complement(18389411..18403800)
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AA seq
927 aa
AA seq
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MWSCVTSTLIVCLLAETSAHSFETEEIVPVRLTGRTAGRVAKRSEEQPSFRLTAFGRNFT
LNLTPDSTFISPTMRVYRIKAKAHEKPESTSKLTDLYKSLNQTEETGAELLKGCFYTGAV
DSNEDSIVSVSLCHGILGSFITDGKEYLIEPKLFGLGTSGKLTEQLHVIKRRRFTKSPQV
SKPLSGIRDDDQNSMSRRRRFVSTPRFIETLVVGDASLTHFYGDEIKHYMLTLMSVAAQI
YKHPSIKNSINIVLVKMLIVEDEEVGPSISGNGGVTLRNFCAWQQLFNPPSHRHPEHFDT
AILFTREDICGHQSCDTLGVADVGTMCDTKRSCSVIEDNGLQAAYTTAHELGHVLSMPHD
DTKMCEQLFGHLGEHHIMAPVFTQLSKTLPWSPCSALHVTEFFDNGHGDCLLDTPETIVA
LPTELPGITYSLDRQCQQIFGEEFSHCPNTSASEVCTQLWCQQEGRSVCTTRNGSLPWAD
GTSCGPNRTCLNSVCMSSEEVMRPKPAVDGGWGEWGPWQPCSRSCGGGVMFSYRECTHPS
PQNGGKYCVGQRVNYQSCNKQACENNQGKSFREEQCEKYNNPNHFDVHGNVKQWIPKYAG
VSLRDRCKLFCRARGSSEFRVFAAKVIDGTPCGPDTTSFCVQGQCIKAGCDLEIDSSKKL
DKCGVCGGNGQSCRMISGSFNKVVHGYKDIVTIPSGATNINIKQQSHGSIPHDGHYLAVR
REDGNYILNGNFSVSTVEQFIPVLGAVLKYSGSSTTLEKLQSFRQLQEPITIQLLSTAGE
SIPPKVKYTFYIPKTMTFSKPKDKKIAGKLIHPFGVPQWVSGEWSECSKTCGSGWSRRSV
ECKDNAGFYSNHCNKDLRPSDIRPCADLPCPIWQIGPWSSCSQTCGHGERQRGILCIDYA
GKIVEPENCDHAKMPESVSEKCFSQEC
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgtgtgtcacatctacattaattgtttgcctcctcgctgaaacatctgctcac
tcatttgagactgaggagattgtacctgtacggctgactggaaggaccgctggacgggtg
gcaaagagaagtgaagaacagcccagcttcagactcacggctttcggcaggaatttcaca
cttaatttgacaccggacagcacctttatatcgccaacaatgagggtttatcgcatcaaa
gctaaagcacatgaaaaacccgagtccactagcaagctgacagatttgtataagtccttg
aatcaaactgaggagactggagctgagttattaaaaggttgcttttacaccggcgctgtc
gactccaatgaggactctatcgtctctgtcagtttatgtcatggaattttaggatcattt
atcacagatggtaaagaatatctaatcgaaccaaaacttttcggcttgggaacatctgga
aagttaaccgagcagctgcatgtcattaaaagaagacgctttacaaagtccccgcaagtc
tctaaaccgctgtcaggcatcagagatgatgatcagaattcaatgtctcgacgaagacgc
tttgtctcgacgcctaggtttattgagactttggtggtcggtgacgcttctctgacacat
ttctatggagacgagatcaagcactacatgctgaccttgatgtcagtggcggctcaaatt
tacaagcatcccagcattaagaactccatcaacatagtgcttgtgaagatgctgatcgtg
gaagacgaagaggttgggccgtccatctccggcaacggaggcgtcactttgcgcaacttc
tgtgcctggcaacagctattcaacccgcccagccacaggcatcccgagcacttcgataca
gccattctttttaccagagaggacatctgtggacatcagagttgtgacacattgggtgta
gctgatgttggaaccatgtgtgacaccaaaaggagctgttctgttattgaagacaatggc
ctgcaggctgcttacacgactgcacacgaactaggccatgttttgagtatgcctcatgat
gacactaagatgtgtgagcagctttttggacatctaggcgagcaccatatcatggcacct
gtattcactcagctcagtaaaaccttgccatggtctccctgcagtgctttgcacgtcaca
gagtttttcgacaatggacatggagactgtttactggacaccccagagacgatagtggct
ttacccactgagctgccaggcataacttacagcctggaccgccagtgccaacagatattt
ggagaggagttttcacattgtcccaacacctcagctagcgaggtgtgcacacaactgtgg
tgccagcaagaaggccggtctgtttgcacaactaggaatgggagtcttccctgggcggat
ggcacgagctgtggccccaacaggacctgcctgaacagcgtatgcatgtcctcggaggaa
gtcatgaggcctaagccagctgtggatggaggctggggcgagtggggaccatggcagccg
tgttccagatcatgcggaggtggagtgatgttctcctaccgagagtgcacccatccatct
cctcaaaacggtggaaaatactgtgtgggccagagagtgaactatcagtcctgcaacaaa
caggcctgtgagaataaccaaggaaaaagtttcagggaggaacaatgtgagaagtacaac
aatccaaatcactttgatgttcatggaaatgtgaagcagtggataccaaaatacgctgga
gtgtcgttacgggataggtgtaaactcttttgcagagcaagaggcagcagtgaattcaga
gtgtttgcagctaaagtaattgatggaaccccatgcggtccagataccacatcattctgt
gtgcaaggccagtgtatcaaagccggttgtgacctggagatcgattctagtaagaagctg
gacaaatgcggcgtgtgtggaggaaacggacagagctgccggatgatatctggctctttc
aataaagtcgtccatgggtataaggatattgtgacgattccaagtggagccactaatatt
aacatcaaacagcagagccatggaagtataccacacgatgggcattatctggctgtacga
agagaagacggtaattatatcttgaatggcaacttctctgtatccacagtggagcagttt
attccagttctgggtgctgtgctgaagtacagtggctcatccactacactcgagaaactt
caaagcttccgccagcttcaggaaccaatcacaatacagctgctctccaccgctggggaa
tccattccaccaaaggtcaaatacaccttctacatccccaaaactatgacttttagcaaa
cccaaagacaaaaagattgccggcaaactgatccatccatttggggtgccacagtgggtc
tcgggcgagtggtctgaatgctccaaaacgtgcggttcaggatggtccaggagaagtgtg
gaatgtaaagacaatgctggcttctattcaaaccactgtaataaagatctcagaccttct
gatatcaggccctgcgcagacctgccatgtccgatatggcaaatagggccttggtcttca
tgctcacaaacttgtggccatggggaacgccagcgtgggattctctgcattgattacgct
ggaaagattgttgaaccggagaactgtgaccatgccaagatgcctgaatcagtatctgaa
aagtgtttctcccaagagtgctga
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