Labeo rohita (rohu): 127177504
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Entry
127177504 CDS
T09007
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127177504 (trpc2a)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127177504 (trpc2a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
127177504
NCBI-ProteinID:
XP_050985762
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Position
15:complement(32411793..32421601)
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AA seq
868 aa
AA seq
DB search
MEKLTPDNWREIVNKKLHFPPELIPAIQEGNMAWVDSLLSLGDGIIRQLDESEDRLWREA
LNLSIRLGSEDIMTSLLLGVKFDFRQIHEALLVAVDTNQPRFVKHLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQRGHDIPLPHAISCTCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMHSAFHLSRELRKLSKKEPEFKPQYL
ALEQLCQEFAVELLGMCRNQSEVSTILNSAEDDSDDEELDEQTFEEGIPNLGRLRLAVNY
NQKQFVTHPICQQVLSSIWCGSLSGWRGSRTAWKLLVSLGIFITMPFLCLVYWIAPKSKL
GKLLKVPVIKFLLHSASYMWFLITLLTESIFMEIYRSDFASRKQNILHNSLHMIWVAGFF
WFECKEVWIEGLKSYFLDLWNILDMMVLSMYLASFTLRILIMLKGYFLCQDSSTQEMCDY
FTNTVREDWKQEDPQLIAETLFAVTSMLSFTRLAYILPAHESLGTLQISMGRMIDDMMRF
MFILMIIGTAFLCGINNIYVPYVVSPHLGRLNETFNFLFWTMFGMANQEYVDMPDYVLAE
FVGRIFYGIFTLLIVIVLLNMLIAMISNSFQRIEDDADVEWKFARSKLYLSYFREGLTMP
VPFNIIPSPKALFYILRSICQKICCCCNKKAPEYPPIASLSSNTLNSSGGQGEGRVPYRL
QVTKALVHRYIEAARREFEESKRKDVGNRITELNKVVGRLHTEMQEFHQKLQWQCKSEPD
QANILGKYIMGAKNNFRDFNKYEAMGCENTGLSISTHPAEEEDDEEKEGEIKAGGIVSEE
REEPESEGPVEPVPGEETTFETASTPDV
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacttacgccagacaactggcgggagattgtgaacaaaaagcttcactttcca
cctgaactgatccccgccatccaagagggcaacatggcctgggtggacagtctcctctcc
cttggtgacgggatcatccgtcagttggacgagtctgaggatcggttatggagggaggcg
ttgaacctctccatccgtctgggcagcgaagacatcatgacctcccttctgctcggcgtc
aagtttgacttccgccagatccacgaggctctgctggttgccgtcgacaccaaccagccc
aggttcgtcaaacacctcctggaccgtctggatcaggagaaaggcaacaaaatggacgtt
cgttctttcagcatggccatcttcgaccactccattgacgattctcaatttgcgccagga
gtgacgccactaacattggcctgccagaaggacctgtatgagattgtaactatgttgacc
cagagaggccatgatattcccctgcctcatgccatctcgtgcacgtgtctggagtgtcgt
aatggccggcaatacgacttgctcaagttctcactgtcccgtataaatacatacagaggc
atcgccagtcgcgcatatttgtcgattacctcagaagacgccatgcacagcgctttccac
ctcagcagggaactgcgcaaactctctaagaaagaaccagaattcaagcctcagtacctg
gcgttggaacagctgtgtcaggagttcgccgtagagcttctgggaatgtgccggaaccag
agcgaggtctccaccatcctcaacagcgctgaggatgatagcgacgatgaagaactggat
gaacagacatttgaggaaggaatccccaaccttggtcgccttcgcctggcggtcaactac
aatcagaaacagtttgtgactcatcccatctgccagcaagtgctctcctccatttggtgc
ggtagcctgtccggttggaggggaagtcgaactgcttggaaactgctggtgtctttgggg
attttcattaccatgccgtttctctgcctggtttactggatcgcccccaagtccaagctg
ggtaaactgctgaaggttcccgtgattaagttcctgttacactcggcatcatacatgtgg
ttcctcatcaccctcttgacagagtcgattttcatggagatctaccgcagcgattttgcc
tctcgaaagcagaacattctccataactctctccacatgatatgggtcgcgggtttcttc
tggtttgagtgcaaggaagtttggatcgagggtttgaagagttacttcctggatttatgg
aacattctggatatgatggtgctgagcatgtatctggcgtccttcacactacgcatcctc
atcatgctaaagggatatttcctctgtcaagactccagcactcaagaaatgtgtgactat
ttcaccaatacagtacgggaggactggaaacaggaggatcctcagttgattgcagagact
ctgtttgccgtgaccagcatgctgagtttcacacgtctcgcctacattctgccggcccat
gaatccctgggaaccctgcagatatccatgggaagaatgatcgatgacatgatgagattc
atgttcatccttatgattattggaacagcatttctgtgtggaataaataacatatacgtc
ccatatgttgtttctccacatcttggcagattgaatgaaacatttaacttcctcttctgg
accatgtttggaatggcaaaccaggaatacgtagacatgcctgattatgttttggctgag
tttgtgggaaggatcttctatgggatattcacactgctcatcgtcatagtcctactcaac
atgcttattgccatgatctccaattcatttcagaggatcgaggatgacgcagatgtcgag
tggaagtttgctcgctccaaactctatctcagttacttcagggagggtctcactatgcca
gttccatttaatatcatcccatctccaaaagctctcttttatatcttaagaagcatctgc
caaaagatttgctgttgctgtaacaagaaagccccagaatatcctcccattgcgtctctg
tctagcaataccctgaatagcagcggaggtcaaggtgagggcagagtgccataccgcctg
caggtgaccaaggctctagtgcaccgctacatcgaagccgcacgcagagagtttgaggag
agcaagcgtaaagatgttgggaacagaatcacagagctgaataaggttgtcggccgactg
cacaccgagatgcaggagttccaccagaagctgcagtggcagtgcaaaagcgagccggac
caggccaacatcctgggcaaatacatcatgggtgcaaagaacaatttccgggactttaat
aagtacgaggccatggggtgcgaaaacacaggcctgtccatcagtacgcatcccgcggag
gaggaagacgacgaagagaaggaaggagagatcaaagcaggagggatcgtctcagaggag
agggaggagcccgagtccgagggccctgtggagcccgtcccaggagaagaaactactttt
gagactgctagcactcctgatgtgtga
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