Labeo rohita (rohu): 127177548
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Entry
127177548 CDS
T09007
Symbol
nlrx1
Name
(RefSeq) NLR family member X1 isoform X1
KO
K12653
NLR family member X1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04137
Mitophagy - animal
lroh04621
NOD-like receptor signaling pathway
lroh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127177548 (nlrx1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127177548 (nlrx1)
04622 RIG-I-like receptor signaling pathway
127177548 (nlrx1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127177548 (nlrx1)
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127177548 (nlrx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRX1_C
LRR_NLRC3
LRR_TMOD-LMOD
NLRC4_HD2
LRR_6
LRR_CARMIL
AAA_16
DUF815
AAA_25
AAA_22
WHD_NOD2
nSTAND_NTPase5
Pox_F15
LRR_MHP1-HER1-GIP3
TsaE
AAA_29
PRAME_C
Motif
Other DBs
NCBI-GeneID:
127177548
NCBI-ProteinID:
XP_050985834
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All DBs
Position
15:complement(21841263..21853312)
Genome browser
AA seq
1010 aa
AA seq
DB search
MWRFGRPPGTEVLRWSCQGSPRDVCCKLHSRALQKTFNISLRSDGICGSLNRPHFSFPTK
TTNSYRNTWKELRTSMCYSISGFNPRFFCTYEPVTADPIEIHKQKLTQWFSHLPQEERQF
GGYFSPETMHVEPLVLERHPDEDRGLNPFKGKTSISTRPPLTAEKLFDAANNNGNKARGL
NVLLYGAVGTGKSTVVRKLVLDWCAGSVFPQFKLVLPFSCEDLSHLSKVTSLRDLVGRKY
MHLRKTPYLSGDNDKAKDVLFIFNGMEKMKLDFRIGSTELCSDPNEALPSGAVVVNLLRK
YLLPEASILVTTRLSAVDRVPKKYINRYVQICGFNDPVRQRAYFTSRLLQQNEGKPSKSA
EMLIEMLYLNLQRESQLATACFLPSYCWLTCATLHLLHFTDTKSPIRTLTGIYTSFMRLN
FGGEVITVDGNVSSQEQQNSLMLYVVRTVGKLAFDGITNKRTSFSAEEMEQWVGGKTKTD
EELQQLAVFRTDVLDFFLVPRDYHGIDPESGGRHYVFAVPAMQEYLAALYVVLGENKTVL
EKLTKEVSEALGQASEDISSLLSILSKVIPFRIFAIFNLLKLFPKFFERVSSHSKGRIAN
TMAAEMFRSEDSFNEDVLDQVEQSLLGVHGPQPQEESYTRAFELYPIFMGGLLHYGNRRL
LDQLGCSIKSHTVSQITRALRKHLIKQSQKKQPPEELMDLLVLLYEFQNPRLTAEVLQSI
KTINLSTVRMTPHKCFVLSMVLSCTSSSFQLNELNLSSCHITPELLQMLWPAFHHTSNLN
LQFNSLGPESCIPLRDLLLEPNCTIKSIQLCDNYLTDTGISHLLEALSGNHSLQRLSLMH
TGLGDQSAQLLAERLGQHEMIQELNVAYNNIGDSAALTLVDACREHPSIHTVHLYLNQLT
DVGKQSLYVRGGPRVKKGRRVKVLASVTEGSDISEDWHPILSVIGKNSLSWDRDRVREQL
LVFLKDLEWGRKQHSSFWKKMHFRRVESTVRQMLHLLQKSSDTGTGSGTK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttttgggaggccaccgggaacggaagtgttaagatggagctgccaagggtca
ccaagagatgtctgctgcaaacttcacagcagggctcttcagaaaacctttaacattagt
ctccggtcagatggcatctgtggcagcctaaatcggcctcacttctcatttccaaccaag
acaacaaactcttatagaaatacatggaaagagctgagaacatccatgtgctattccatc
tctggattcaatcctaggttcttttgtacttatgaacctgtcacagcagatcccattgag
atccacaaacagaagttgacacaatggttcagtcaccttcctcaagaggagaggcagttc
ggtggctacttttctcccgagactatgcatgtggagccacttgtcctagagcgtcatcca
gatgaggacagaggtcttaatcccttcaaaggaaagacaagcatatccacacgtccccct
ctcacagctgagaagctctttgatgctgctaacaataatggaaacaaggcacgaggattg
aatgttttgctatacggtgctgtcggcactgggaaaagtactgttgtgcgtaaactggtg
ctggattggtgtgctggatctgttttcccccagttcaaacttgtgttgcccttctcctgt
gaggatctttcccatttatccaaagtgacatcccttcgggacctcgtgggaaggaagtac
atgcaccttcgcaagacaccttaccttagtggagataatgacaaggctaaggatgtcctc
ttcatcttcaatggaatggaaaagatgaagttggattttcgcatcggctccacagagtta
tgtagcgatcccaatgaggctctcccatcgggagctgttgttgttaatctactcagaaaa
tacctgttacctgaggccagcattttggttacaaccagactatctgctgtggacagagtt
cctaaaaaatacataaaccgttatgtacaaatctgcggcttcaatgatcccgttcgacag
agagcctacttcaccagcaggctcttgcaacagaacgaaggcaagccgagcaagtcggcc
gagatgctcatagaaatgctttacctaaatctacagcgggagagtcagttagcaaccgcc
tgcttcttaccatcttattgctggctcacatgtgccactctgcatttactgcattttact
gacacaaagtcaccaattcgtaccctcactggcatctacaccagcttcatgaggctcaac
tttggaggagaagtgatcaccgtggatggaaatgtctcttcacaagagcaacagaactcg
ttaatgctctatgtggtgcgtactgttggcaaactagcttttgatggcatcaccaacaag
cggacatcgttctccgctgaagaaatggagcagtgggttggcggtaagaccaaaacggat
gaagagctccagcaactagcggtgtttcgcacagatgtgcttgacttctttctagttcct
cgtgattatcacggaatagatcctgaatctggtggtagacactatgtgtttgctgttcct
gccatgcaggaatatctagctgctctttacgtcgttcttggcgagaacaaaaccgtccta
gagaagttgactaaggaggtttcggaggctttgggacaagccagtgaggacatctcaagc
ctactgagcatcctctccaaagtcatacctttccgaatctttgctattttcaacttgctt
aagttgttcccgaaattcttcgagcgagtcagcagccacagcaaagggcgtatcgcgaac
accatggcagcggaaatgtttcgttcggaggatagcttcaatgaagatgtcttggatcag
gtggaacaaagcctgctgggtgtgcatggtccacagccgcaggaggaaagctacacacga
gcgtttgaactctaccctatcttcatgggtgggcttcttcattacgggaaccggaggctg
ttagaccagctcggatgcagcatcaagagtcacacggtttctcagatcacccgtgcactg
aggaaacacctgatcaagcagagccagaagaagcagcctcctgaggagctcatggacctt
ctggtcctgctgtatgagttccagaaccctcggctcacagctgaagtcctccagtcaatc
aagaccatcaacttgtcaactgtacgcatgacaccacacaagtgcttcgtgctaagcatg
gttctgagctgcacgagctcaagcttccaactgaatgagctcaacctctcctcctgccac
atcactccagaattactgcagatgctctggccagccttccatcacactagcaacctcaat
cttcagtttaacagcctgggtcccgagtcctgcattccactgcgagatctcctgcttgag
cccaactgtactattaagtcaatacagttgtgtgacaactacctcaccgacaccggcatc
agccatctactggaagctttgtctggtaaccactctcttcagcggctgagtctgatgcac
acaggcctcggtgaccaatcagcacagctgctggccgagagactgggccagcatgaaatg
atacaggagctgaatgtggcctacaacaacatcggagacagtgcggctctcacgctggtc
gatgcctgtcgtgaacatcccagcatccacacagtacacctatacctaaaccagcttacc
gatgtgggcaagcagtcgctgtatgtgcgtggtggacctcgggtcaagaagggtcggcgg
gtgaaggtcctggcatcggtaaccgagggttcggacatctcagaggactggcatcccatt
ctgagcgttattggaaaaaattctctttcatgggacagagaccgtgtacgtgagcaactg
ctggtcttcctgaaagacctggaatggggtcgcaaacagcactcgagtttctggaaaaag
atgcacttccgacgtgttgagagcaccgtgaggcaaatgctgcacttactgcaaaagagc
agtgatacgggaacagggtccggtacaaaataa
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