Labeo rohita (rohu): 127177577
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Entry
127177577 CDS
T09007
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127177577 (hnf1ba)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127177577 (hnf1ba)
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GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
127177577
NCBI-ProteinID:
XP_050985876
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Position
15:19322530..19334412
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AA seq
558 aa
AA seq
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MFAKMVSKLTSLQQELLSALLDSGVTKDVLLQALEDLDPTPSAFGVKLDSLQMSPSGSKL
SDTDSKPVFHTLTNGHGKGKLSGDEGSEDGDDYDTPPILKELQSQNTEEAAEQRAEIERM
LAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYV
RKQREILRQFNQAQGSGSNMSDKANQDQVLLFFSEFSQSGQSMGQSVDDAGIEPACKKMR
RNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVT
EVRVYNWFANRRKEEAFRQKLAMDAYSGPTHSLNSLLAHGSPHHPQTSSSPPSKMQGVRY
SQQGPGEVSSSTTINHHSSNAMATSQSVLQQVSPGALDPSHSLLSPDVKMISVSGGGLPP
VSTLTNIHASHHVHQQTPNLIMPLSGVMAIAQSLNTSQAQTVPVINSVAGSLAALQPVQF
SQQLNGPHQQLMQQSPGHMSQQPFMASVSHSHMYSHKQEPPQYSHSSRFPPAMVVTDANS
LSTLSSMSSSKQCPLQAW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaaatggtttctaagttgacatctttgcaacaggagcttcttagcgccttg
ttggactctggagttaccaaagatgtgcttctgcaagcgctggaggacctggacccgacc
ccgagcgcttttggagttaaactggacagtctgcagatgtccccctccgggtccaaactc
agtgatacggattcaaagcctgtgtttcacacgctgaccaatggacacggtaaagggaag
ttatcaggggatgagggctcagaggacggggatgattacgatacaccgccgatactgaaa
gagctccagtctcaaaacacagaagaagcagcggagcagagggcagaaatcgagcgaatg
ttggcggaggacccgtggcgagcggcccgcatgatcaaaggctacatgcagcagcacaat
atccctcagcgcgaggtggtggatgtgacaggcctcaatcagtcgcacctgtcgcagcac
ctgaataaaggcacgcctatgaaaacgcagaaacgcgcggcgctctacacctggtacgtc
aggaaacagcgggagatcttgcgacaatttaaccaggcacaaggctctggcagcaacatg
tcagacaaagccaaccaggatcaggtgctgctttttttctcagagttcagtcagtccggg
cagagtatggggcagtcagtggacgatgctggcattgaacctgcttgcaagaagatgaga
cgcaaccgcttcaaatggggtcctgcatcccaacagattctttaccaggcttatgaacga
cagaagaaccccagcaaagaggagagggaggcactggtggaggagtgcaaccgagctgaa
tgcctccagagaggagtatcgccttctaaagctcacgggcttggctccaacctggtcacg
gaggtgcgagtctacaactggtttgccaacaggagaaaggaggaggcctttagacaaaaa
ctggctatggatgcctatagtggaccaacgcacagtctgaactcccttcttgcacacggt
tctccacatcacccacaaaccagcagttccccaccaagcaagatgcaaggtgtccggtac
agccaacaaggtcctggtgaagtcagttcttcaacaacgatcaaccaccatagcagcaat
gccatggcaaccagccagtcagtgttacagcaggtctctccgggggcgctggaccccagc
cacagcctcctgtcacctgacgtcaagatgatctctgtatcaggcggaggtcttcctcca
gtcagcaccctgaccaacatccatgcatcccaccacgtgcaccaacagacccccaacctc
ataatgccgctttctggagtcatggccatcgcacaaagtttaaacacgtcacaggcgcag
acggtacctgtcatcaacagcgttgcaggcagtctggcagctttgcagccagtgcagttc
tcgcagcagctgaatggcccacaccagcagctcatgcaacagtcacctggtcacatgagc
cagcagcccttcatggcctccgtctcacactcacacatgtactcacacaagcaggagccg
ccccagtattctcactcatctcggtttccccccgccatggttgtgacagacgccaacagc
ctcagtacactgagctcaatgtcctccagcaaacagtgtccactgcaggcctggtga
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