Labeo rohita (rohu): 127177604
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Entry
127177604 CDS
T09007
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127177604 (smc4)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
127177604 (smc4)
Condensin II
127177604 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
TPR_MLP1_2
CCDC39
AAA_29
DUF3450
Motif
Other DBs
NCBI-GeneID:
127177604
NCBI-ProteinID:
XP_050985915
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All DBs
Position
15:3139962..3162681
Genome browser
AA seq
1295 aa
AA seq
DB search
MPTKTTKSSTAAKRAAEALDESDDEQSAARKPTSAAAAESSTPPRLHDAAPGESAEELDN
RSLEEILASIPPPPPPAMSSEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDAHPDIQSCTVEVHFQKIVDKEGDDY
EVIPNSSFYVSRTAAKDNSSSYHINGKKATFKDVGILLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPINILCRRVELLNEQRGEKLNRVKLVEKEK
SALEGEKNKAVEFLTLENDIFKKRSLLCQFYVHDLQKRASAKEAEKQQIQEDTKELSDKS
SQLTEEMKTKNEELKGVEKKLTKLTKFIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQ
KQLQKDKEKLEEVRSVPASSEKIITEASAQKEELEKKKLVEEQKLAQVMESLKEETSGLQ
EDKEKKEQELLELSKAVNETRSRMDVAQSELDIYLSQHNTAVNQLNQAKNALQEAVDTLR
ERRAAIKDLNVKIPQCEEQLKKDEQELEQISEQDRQKRVQVGDMRQKVAEAKSSLSTNRS
RNKVLDALMQQKRSGKIPGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDTIDTAQKCV
TFLKTQNIGVATFIGLDKMKVWQQSMGSISTPENIPRLFDMVRVKDESVRPAFYFALRDT
LVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSVCADVTQEQ
LDKMERDLNKEVTQLQDWQQRKQQLEEKVHKARRELRDMKNTLEKYTATIQSLTEQELHL
KTQIKDLEANVISAAPDKAKQKQMEKSLEVYKKDFEAASTKAGKVEAEVKRLHTLIVDIN
SHKLKAQQDKLDQINTQLDECSSAVTKAQVAIKTAGRNLKKSEDSVSQLEKEIGENEKLM
EELTEQLKKLEEQAGEIMQTYQQAEEALPEVQEQHRGVLQEIKALQEQEHALQKESLNVR
LKVEHIDTAITECHNKIKHWEKEASKLSLHSIDGAPTEELPALNPEQLEDVSNPDVIKNE
IALLEDRCSNMKPNLGAIAEFKKKEELYLQRVAELDDITTQRDAFKRGCEDLRKQRLHEF
MAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGE
KTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNM
FEMADRLIGIYKTHNTTKNVAINPKTIVLREIETA
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgaaaacaaccaagagctcgacggccgctaaaagagcggcggaggcgctggac
gagtccgacgatgagcagagcgcagcccgcaaacccacgagcgccgccgccgcggagagc
agcacgccgccccgcctgcacgatgcggctccgggcgagtctgctgaggagctggataac
cgcagtctggaggagatcctggccagcatccctcctccgccgcctcccgccatgagctcc
gaaccgggggccccgcgcctcatgatcacgcacatcgtcaacagaaacttcaagtcctac
gctggagagcagattctggggcccttccataagcgcttttcctgtatcatcggtccaaac
ggcagcggcaagtccaatgtgatcgactccatgctcttcgtgtttggatacagagctcag
aagattcgctcgaagaagctgtcggtgctgatccacagttctgacgcccatccggacatc
cagagctgcactgtagaggtgcacttccagaagatcgtcgacaaggaaggagacgactac
gaagtcattcccaacagctcgttctacgtgtcgagaaccgctgccaaagataattcctcc
tcctatcacatcaatggcaagaaagcgaccttcaaagatgtgggcatattactgcgcagc
cacggtattgacctggaccacaaccgcttcctcatcctgcagggtgaggtggagcagatt
gccatgatgaagcccaaaggacagacggagcatgacgagggcatgctggagtacctggag
gacatcatcggctcctgccgtctcaaagagcccatcaacatcctgtgccggcgggtcgag
ttactgaacgagcagcgaggagagaagctgaatcgagtgaagctggtggagaaggagaag
agcgctctggagggagagaagaataaggccgtggagttcctcactttggagaacgacatc
tttaagaagaggagcctcctgtgtcagttctacgtgcatgatctacagaagcgtgcgtca
gccaaagaagccgagaaacagcagattcaggaggacacaaaggaactgagtgacaaaagc
agccagctgacagaggaaatgaagaccaagaacgaggagctgaagggcgtggaaaagaaa
ctaaccaagctgaccaagttcatagagagccagaaggagaaatttacccagctggacctg
caggatgtggaggtgcgcgagaaactcaaacacaccaagagcaaaaccaagaaactgcag
aaacagcttcagaaagacaaggagaagctggaggaggtgaggagcgttcctgccagcagt
gagaagatcatcacggaggcgtctgctcagaaggaggagctggagaagaagaagctggtg
gaggagcagaagttggctcaggtgatggagagcctgaaggaggagaccagcggcctacag
gaagataaagagaaaaaagagcaggagcttctggagctgagcaaggcggtgaacgagacg
cgttcacggatggatgtggcgcagtcagagctggacatctacctgagtcagcacaacacc
gctgtgaaccagctcaaccaggccaaaaatgctctgcaggaggctgtggacacgctgagg
gagaggagagccgccatcaaagacctcaatgtcaagataccccagtgtgaggagcagctc
aagaaggacgagcaggagctggagcagatctctgagcaggaccggcagaagcgggtgcag
gttggagacatgaggcagaaggtggctgaagccaagagctctctgtccaccaaccgcagc
cgcaacaaagtgctggacgcactcatgcagcagaaacgctcgggaaagatcccgggcatc
ctgggacggctgggcgatctgggagctattgatgagaaatacgacatcgccatctcctct
agctgcggctcgctggataatattttagtggacaccattgacacggcgcagaaatgcgtc
acgttcctaaagacccagaacatcggtgtggccacattcatcggtctagacaagatgaaa
gtgtggcagcagagcatgggctccatctccactccggagaacatccctcgtctttttgac
atggtgcgggtgaaggacgagagcgtgcggccggcgttctacttcgctctcagagacacg
ctggtggctaaagacctggagcaggccacgcgggtggcgttccagaaggacaagcgctgg
agggtcgtcacgctgcaagggcagatcattgaacaggctggtaccatgactggaggagga
ggacgagtgatgaagggcaggatgggctcctcagtctgcgctgatgtcactcaggagcag
ctggataaaatggagagggatttgaacaaagaggtgacgcagctgcaggactggcagcag
aggaagcaacagctggaggagaaggtgcacaaagccagacgtgagctgagagacatgaag
aacacgctggagaaatacacagccaccattcagagcctgacggagcaggagcttcatctc
aagactcagatcaaagatctggaagccaacgtcatctccgctgctcctgataaagccaaa
cagaagcagatggagaagagcctggaggtctacaagaaagactttgaggcagcgtccact
aaagcaggaaaggtggaggcggaggtgaagagactgcacacgctcatcgtggacatcaac
agccataaactgaaggcccagcaggacaaactggaccagatcaacacacagctggacgag
tgctcctcagccgtcaccaaagctcaagtggccattaagactgctggacgtaatctgaag
aagtccgaggacagcgtgtctcagctggagaaggagatcggtgagaatgagaagctgatg
gaggagctgacggagcagctgaagaagctggaggagcaggcgggagagatcatgcagacg
taccagcaggctgaggaagctctgccggaggttcaggagcagcatcgtggagtcctgcag
gagatcaaggccctacaggagcaagagcacgcgctgcagaaggagtctctaaatgtgcgg
ctgaaggtggagcacattgacacggccatcacagagtgccacaacaagatcaaacactgg
gagaaagaggccagcaagttgtctctgcactccatcgatggtgctccaacagaagagctg
cctgcactgaacccagagcagctggaagacgtcagcaatccagacgtcatcaagaatgag
atcgctctgctggaggaccgctgttccaacatgaagcccaacctgggagccatcgcagag
ttcaagaagaaggaagagctgtatctgcagagggtggcggagctcgatgacatcactaca
cagagagacgccttcaagagaggctgcgaggacctgcgcaagcagaggctacacgagttc
atggctggattcaacatcatcaccaacaaactgaaggagaactaccagatgctcacgtta
ggaggagacgccgagctcgagctggtggacagtctggatcccttctctgagggcatcatg
ttcagtgtgcgtcctcctaagaagagctggaagaagatctataacctgtcaggaggagag
aagacgctgagctctctggcgctggtgtttgcgctgcatcacttcaagcccacgccgctc
tacttcatggacgagatcgacgctgccctcgacttcaagaacgtctccatcgtggcctgt
tacatatacgagcaaaccaagaatgctcagttcatcatcatttccctgaggaacaacatg
tttgagatggccgaccgtctcatcggcatctacaagacgcacaacaccaccaagaacgtg
gccatcaaccccaaaaccatcgtcctgcgtgagatcgagacggcctga
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