Labeo rohita (rohu): 127177612
Help
Entry
127177612 CDS
T09007
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03440
Homologous recombination
lroh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127177612 (brca2)
03460 Fanconi anemia pathway
127177612 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127177612 (brca2)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127177612 (brca2)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127177612 (brca2)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127177612 (brca2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127177612 (brca2)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127177612 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
127177612 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
127177612
NCBI-ProteinID:
XP_050985929
LinkDB
All DBs
Position
15:28075868..28092028
Genome browser
AA seq
2708 aa
AA seq
DB search
MFDNFLHRIDKELGPLYPDWFEELTAKVSRDEGRPDISKVEEEEAAVKVPETSALASQLF
STPKIFKQQRFQSPASIPNEESPCEVANGDLSAFPWTESSPCLFDSAKDSQRFDRSCEKT
RDCFGILDTPKRTLARSAKQISESLGAQINPDLSWTSSFNTPSSLTPTVILPKTEDRAPS
SSGLKDKEAIFVRKLFPSLSKDSASNATLSDAALKQNVKSETLQADDLVEKSVCSPNTSF
DTSGLWKQKVPSAIEDGDVRSTVQNVLDGAEDVLSIFFSNSTSTLRKIKTKERIRKRITD
CSKDVRSVVLTSEPEEILQDDVETKSPSKNKDIIQWTPLSLSESILNDCSDASLINSHNI
EASSETNGGTVFNCIAESSQTFSQSVKLLIPGSYPEGAECQKTLLEKSSAFMPTRKTRKF
VYQVPSSDLSKTVIGHKETQPVCLDQTLKEDPSIEEVCSDLTESRITNENAVNNHPQPQD
VKELSIEPHDLDHGLDMTQLSKAFAEDFTQEKMLGALPVQSDQNIQVQYKAELEEKNEDV
SHNDVSNLADVTVDSSNKSTVMLKTSEISHDSGCPTTFPDLDGMTASCTDIKELFPSFKT
ANNKSISISNEAIMKARASLDEVAGDVLISTLNGTSPKDYQTIETLCKSISGSTNANRPP
LGQSSFPTHASRVRVSDAPKSDSPKSFKINISSCSSPQSNESDYKTGSKRNITVSDVGFK
TETLLKEKVGRGSDSSKCIHQKLDFKSSAERQTVFEKPTAVDSSRDDDEKNGTLTASQKA
DVTELCNLLEEANSQHEFTQFKPTNPGLDNHTTEKEWDPDILNGIDFDDSFNCDGVKGKH
PIKMDASSVNSSDHIQIADKLTCTMSKETQNGTVPLSVAEDRQKSAPIHCFGFKTAKGEA
ISISEKSLNDARHFFEEDDQKAIYNKDVKIGIIKPDCAEIVPSVNTSDSTNTENKTYVQT
ANDGNFSCGDVNAACKEINKQLAGNEGMEQNCLGGKTDVVCVDSNSHFGFSTARGAKLKV
SEKALLQARRLLNDVDSVESQTHKPALHESGKLDASMSTKTKAVSRSKTSMKISQPHLVT
EISDSVDNPSFSSEKVFQEWKSSNDSKEVFAKICPSETFLPQSEESYGFQTASGKGVSIS
ASALKKAKNIFKDCDENIDLESVKMEGKNEKLDVKSAFTPNSKSVTFSNMSLIEANTVFR
DSDLTNAFSLQPSSVQQPPQEELFKEKSLQSEFKHPSELLPPNGNCGFSTASGKKVSVSA
GALQRAKDLLSESVDGFSCADGSPKTKPVVDIQTDTSSIGIHKGFSTAGGKKVAVSAVGL
QKAKNLFRDCEEESLSSEDPQHQNFKGFSDVSEKPLTAFAGCSHKHETGDSSGRSIGFST
AGGKKVAFSAAALQRAKNLFKDCEEESLASGSLQHQGCHGFTTASGKDVTVSEKALSEVR
AAFAGCDDTFFRHGPENSLGNNTGFSTAGGKKVAVSATALERATSILKDCEEENVSSEDV
PPQTNSSHKSSEDVVDGNLLFEHLNKNNYGFSTASGKGVSVSKVALEEASKLFRDCDAQI
TATDSQLLQGDSSKCHPKDRQTKTTVHPLPSKATQNEPAQLDLHSLDFNSCTDTQQKYFE
QEAMACTKALLADDDLNESASLAMTEDKKSPSVHDLQAQGSFGHNRRKRPFDARNAADSG
QPPLKRQLLSEFDRTLDARTSGLTPLKSCPNGTLRDRRVFSYNVHLKPNVTGPDWYPVNQ
KSNDLKQQCSTVSVQNRCNSDPKGGVFVPPFQKGIKTRTSNCQDVSKVSTGFVPPFKKDN
KETTEHSNQIDQNMTISTSHSDSVAQYCDEKKLLEGSNPKPTTSVESVPLKIMDSEEKDT
EPCQETLSLARDMQDMRLRKKKRQTIRPLPGRLYLAKTSGNPRIGLRDAVGCKCPGQYTQ
EELHQHGVPHKILQITSENAESFRFDCNDFFKRELLNESGAVQLADGGWLVSDNKGTVGK
DEFYRALCDTPGVDPKLISDAWVFNHYRWIVWKRASMERTFPDLMGGLCLTPEQVLLQLK
FRYDVEVDHSQRSALRRIMERDDTPAKTLVLCVCGVAQTPQNPEKPMKDDKTPNAKMESC
VVWLTDGWYSIKGLLDPPLSAMLNKGRLRIGDKIVTSGAELVGSQEACPPLEAPESLMLK
ISANSTRRARWDTKLGYYRDPRPISLTLSSLFTAGGVVSCVNIVVLRSYPTQWMEKKPNG
VFIFRNDRAEDREARKHSNSKHKSMDLLISKIQTQFEKEMEGKKKSRGQRRTFGRHEIEA
LQDGEDLYEAMERDPAVETHLSARQMDAVSKYRRSLEERRQAELQERVQKAVMEAQEAEG
GCPNRDVTPVWKLSITDANDLQSNCVYTLNIWRPSQDLYGLLREGHRYRAYHLATSEGKK
RSGIAHIQLTATKKTLFKDIEVSPEWLHQHFHARECVRFKDLQNPQFSSPCGEVDIVGCI
VSIEGKQGHCPLLHLVDENFDLVSVRTYCSLEQLSVEELVKPRALVALGNLQVKPLSGPV
PSLYAGEQAVFSVNPKESHLQEAMTRLKTFVQTCERFFSIAEEKLSDVVPSGVLGSFQSP
RTPGVQSNPKINGWVTPQQKTSMFSPFTPLNRRAPAPACNSEGKDPKSLKRRRGLDYLSR
IPSPPPINPLKTTASPCVNRTFNPPRRSVTPKPPQNESPRASRPPPGEEKWVNDEELAMI
DTQALLEG
NT seq
8127 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaatttccttcatcgaattgacaaagaacttggacctctttatcctgactgg
tttgaggagttgactgcaaaagtttccagagatgaaggacgtcctgacatttcaaaagtt
gaggaggaggaggcggctgtcaaagtaccagagacatcagccctggccagtcagctgttt
tctacacccaaaatatttaagcaacaacgctttcagtcccctgcctccattcctaatgaa
gagtccccttgtgaagtggcgaatggagacttgtcagcttttccctggacagaatcaagc
ccttgtttgtttgattcagccaaagacagtcaaaggtttgacagatcctgtgaaaaaact
agagattgctttggcattctggatacaccaaaaaggactttggcacgttcggcaaaacag
atatcggagagtcttggggcacaaatcaaccctgacctgtcctggaccagctcctttaac
acaccgtcatctttgactcccactgtgatattacccaaaacggaggaccgcgctccatca
tcaagtggcctcaaagacaaggaagcaatttttgtgcggaaactatttccatctctctcg
aaagactctgcaagcaatgcaacattgagtgatgcagcactaaaacaaaatgtcaaaagt
gagacacttcaggctgatgacctggtagaaaagtctgtttgctctccaaatacatctttc
gatacaagtggactatggaagcagaaggttcccagcgctatagaggatggggatgttcgc
agcacagtgcagaatgttcttgatggtgctgaggacgtgttgtcaatattcttcagcaac
agcacttcaactctgcgaaaaatcaaaaccaaagagaggatcagaaagagaataacagat
tgctcaaaggatgtcagatcagttgttctcacttcagagccagaagagatattacaggat
gacgtagaaacaaaaagcccaagcaaaaataaagacatcattcagtggaccccactaagt
ttatcagaatccattctcaacgattgttcagacgcatctttgataaacagtcacaacatt
gaagcatccagtgaaactaatggcggtactgttttcaactgcattgcagaaagtagccaa
acattttcacagagtgtaaaacttcttatccctggatcttatccagaaggagctgagtgt
cagaagactttgttagagaaatcatctgctttcatgcctactagaaagactagaaagttt
gtgtatcaagtgccaagttcagatctgtcaaagacagtaattggacacaaagaaactcag
ccagtatgtttggaccaaacgctcaaagaagatccctcaatagaagaagtgtgtagtgac
cttactgagtccagaatcaccaatgaaaatgctgtcaataatcatccacagccacaagat
gtcaaagagttatctatagaaccccatgatcttgaccatggactggatatgacgcagctt
tccaaagcatttgcggaggatttcacacaagaaaagatgctaggagcactgcctgtacag
agtgatcaaaatatccaagtgcaatataaagcagaacttgaggagaagaatgaagatgtt
agtcacaatgacgtctctaatttagcagacgtgactgtggactcttcaaacaagtctaca
gtcatgcttaaaacttctgaaatcagtcacgacagtggttgccccaccacctttccagat
ttggatggtatgacagcctcttgcacagacatcaaagagctttttccttcttttaaaacg
gcaaacaataagtccatttccatatcaaatgaggctataatgaaggccagagcatcgtta
gatgaagttgcaggggatgttttgatcagcaccttaaatggaactagtccaaaagattat
cagacaatagaaacattgtgcaaatccatttcaggaagcactaatgcaaacagaccaccc
ttgggacagtccagctttcctacccatgcatcaagagtgcgtgttagtgatgctccgaag
agtgacagtccaaagagctttaaaattaatatttcaagttgctcttcaccacagtcaaat
gaatctgattataaaactggttcaaagaggaacattacagtttcagatgttggctttaaa
acagagactcttttgaaagagaaagtggggagaggttcagattcatcaaagtgcattcat
caaaaactggatttcaaaagtagtgctgaaagacagactgtgttcgaaaaacccaccgca
gtggactccagccgtgacgatgatgagaagaatggcactttgacagcatctcaaaaggct
gatgttacagaattgtgcaatcttttagaggaagcaaatagtcaacatgaatttacacag
ttcaaaccgacaaatcctggcttagacaaccacactacagaaaaagagtgggatccagat
atactcaatggcatcgactttgacgatagttttaactgcgatggtgtgaaaggaaagcat
cccatcaagatggatgcttcttcagtaaacagttctgatcatattcaaattgctgacaaa
ttaacgtgtaccatgtcaaaggaaacacaaaatggcactgtgcctttgtcagtggctgag
gacaggcagaagagtgctccaatccattgttttggttttaaaactgctaaaggggaagct
ataagcatctcagaaaagagtttaaacgatgcgaggcacttttttgaagaggatgatcaa
aaagccatatataataaagacgtcaagattggcataataaaaccagactgtgcggaaata
gtgccttcagtcaatacttctgacagtacgaacacagaaaataaaacctatgttcaaact
gcaaatgatggaaatttcagctgtggagatgtaaatgcagcttgtaaagagataaataag
cagctggcaggaaatgaaggaatggagcagaattgtttaggtggaaaaacagatgttgtt
tgtgttgactccaatagtcattttggatttagtacagctaggggagcaaagctgaaagtg
tctgaaaaggctcttctgcaagcaagaagacttcttaatgatgttgacagcgtggagtcg
caaactcacaaacccgctctccatgaatctggaaaacttgatgcctctatgtcaacaaaa
acaaaagctgtttctaggagtaaaacctccatgaaaataagtcaaccacacttagtaact
gaaatatctgatagtgtggataatccttccttcagcagtgagaaggtcttccaagaatgg
aaatctagcaatgattccaaggaagtttttgcaaagatttgtccctcagaaacttttttg
cctcagtcagaggaaagctatggctttcagactgccagtgggaaaggagtttccatttct
gccagtgcccttaagaaggcaaagaacatatttaaagactgtgatgaaaatattgacttg
gaatctgtgaaaatggagggaaagaatgagaaactggatgttaaaagtgcatttactcca
aattctaaaagtgtgacattttcaaatatgtctctcattgaggccaacactgtttttaga
gactctgacctgactaatgccttctcactgcagccttcttcagtccagcaacctcctcag
gaagaactatttaaggagaaaagccttcaaagtgaatttaagcatccttctgagttgctt
cctcctaatggcaactgtggtttcagtactgccagtggtaagaaggtgtccgtctcagct
ggagcactgcagagagctaaggacctgttatctgagtctgttgatggtttctcatgtgct
gatggatctcctaaaacaaagccggttgttgatatccaaacggacactagttctatagga
atacacaaaggattctcaacagcaggtggaaagaaggtggctgtctctgctgttgggctg
cagaaagcaaagaatctcttcagagattgtgaagaggaaagtttatcatctgaagatcct
caacaccaaaactttaaaggtttcagtgatgtctcagaaaagccactgacggcatttgca
ggttgcagtcataagcatgagactggggattcttcaggaagaagtataggattcagtaca
gccggtgggaagaaggttgccttctctgctgctgccctgcaaagggcaaaaaatcttttt
aaagattgtgaggaggagagtttagcttctgggagtcttcagcaccaaggctgtcacggt
ttcaccactgccagtggcaaagatgttactgtctctgaaaaggcactgagtgaggttaga
gcggcttttgcaggatgtgatgacaccttcttccgtcatggacctgaaaattctttagga
aacaacactggtttctctacagcaggtgggaagaaggtggccgtctctgctaccgcactt
gagagggccacgagtatccttaaggattgtgaagaggaaaatgtgtcatctgaggacgtt
ccacctcaaactaatagttctcataaaagcagtgaggacgtagtggatggaaacctactg
tttgaacatctaaacaagaataattatggtttcagcaccgcaagtgggaaaggtgtgtct
gtatcaaaagttgcccttgaggaagcttctaaattattcagagattgtgatgcccaaatt
actgctactgatagccagcttctacagggtgattcctcaaaatgccatcctaaagacaga
caaaccaaaaccactgtacatcctttgccatctaaagcaactcagaatgaacctgcacag
ctagacttgcactctttggattttaacagttgcacggacacccagcagaagtactttgag
caggaagcaatggcttgcactaaggctttactggcagatgatgacctaaatgaatcagcc
agtttggcaatgacagaggacaaaaaaagtccatctgttcatgatcttcaggctcaggga
tcttttggccataacagaaggaagcgtccgtttgatgccagaaatgcagcagattcaggt
cagcctcctttgaaaagacaacttctctcagagtttgaccggacgttagatgcaaggacc
tcaggcctcacaccactgaaaagctgtccaaatggaactctaagagacaggcgtgtcttc
agttacaatgtccacctcaagccaaatgtcactggtccagattggtatcctgtgaaccaa
aagtcaaatgacctcaagcaacagtgttcaactgtgtctgtccaaaacagatgcaactca
gaccctaaaggaggtgtgtttgtgccccctttccaaaagggtataaagactaggacatca
aactgtcaagatgtctctaaagtgtccactggttttgtcccacctttcaagaaggacaac
aaagaaacaactgaacatagcaatcaaatagaccaaaatatgacaatttctacatcacat
agtgacagtgttgcacaatattgtgatgagaagaagctacttgagggttctaaccctaaa
ccaaccacttcagtggaaagcgtgcctttgaaaatcatggactctgaagagaaagacaca
gagccttgccaggagaccttgagcctagccagggatatgcaagacatgagactccgaaag
aagaaaaggcagactattcgtcctctccctggcaggctttaccttgccaaaacttctggt
aatcccagaataggtctgagagatgctgtgggatgcaaatgtcctggtcaatacacacag
gaggagctgcatcagcatggagtacctcacaagatcttacaaataacaagtgaaaatgct
gaatcattcagatttgactgtaatgacttcttcaaacgtgaactcctcaatgagtctggt
gctgtccagctggcagatggaggctggttggtttcagacaataagggtactgtgggcaaa
gacgaattttatagagcattgtgtgacacgcctggtgttgatcccaaactgatcagtgat
gcctgggtgttcaaccattaccgatggattgtatggaaacgggcctccatggaaagaaca
tttccagatttgatgggtggcctatgtttgactccagagcaagtacttttgcagctaaaa
ttcagatatgatgtggaagtggaccacagccagagatccgctctcaggaggatcatggag
agggatgacactccagctaagacattagtgctctgtgtatgtggtgttgctcaaactcct
caaaatccagaaaagccaatgaaagatgacaaaactcctaatgcaaagatggagtcctgt
gtggtctggctcacagatggctggtactccatcaaaggcttgttagaccctccactctct
gccatgctgaacaagggccgtctcagaatcggtgataagattgtgaccagtggagccgag
ttggttggttcccaagaagcctgtcctccactggaagctcctgaatctctgatgctaaag
atttcagccaacagcacaagacgagctcgatgggacactaagttggggtactaccgtgac
cctcggcccatcagcctcacactatcatcactgttcactgctggaggtgttgtgagctgt
gtgaacattgtggtgttgagaagttaccccactcagtggatggagaagaagcccaatggt
gtctttatatttcgcaacgatcgtgctgaagatcgagaggccagaaaacacagcaactcc
aagcacaaatccatggatcttcttatttccaaaatacagactcaatttgaaaaagaaatg
gaaggtaaaaagaaaagtcgaggacaaaggaggacatttggtcgacatgagattgaagct
ctgcaggatggggaagatttgtatgaggcaatggagagggatcctgctgttgagacccat
ctaagtgcaaggcagatggatgcagtgagtaagtacagacgctctttggaggaaaggagg
caggcagagctacaggagcgtgtgcagaaggctgtgatggaagcccaggaggccgagggt
gggtgtcccaatcgagatgtcactcctgtttggaagctcagcattactgatgccaatgac
ctgcagagcaactgtgtgtacaccctgaatatctggcgcccgtcacaggacttgtatggc
ttgttaagagagggccacagatatagggcgtatcaccttgccacatcagaggggaagaaa
cgctcaggcattgctcacatccagctcactgccaccaaaaaaacactcttcaaggatatt
gaggtgtctccagaatggttgcatcagcatttccatgctcgagaatgcgtacgattcaaa
gatcttcaaaaccctcaattcagctcaccttgtggggaggtggacattgtgggatgtatt
gtctccatagaaggcaaacaaggccattgcccattactgcatcttgtggatgagaacttt
gacctggtctctgtgagaacctactgtagtctagagcagttatctgtagaagagctagta
aagccacgagcactggtcgctcttggtaatcttcaggtgaaaccgctctctggacctgtg
ccaagcctttatgcaggagaacaagcagtattctctgtaaaccccaaagaatcccatctg
caagaagctatgacccgtctgaagacttttgtccagacttgtgagcggtttttcagcatt
gcggaggagaagctctcagatgtggttccttcaggtgtcttgggttcttttcagtctcca
agaactcctggtgtgcagtctaatccaaaaattaacggctgggtaaccccacagcagaaa
accagcatgttttcgcctttcactccactaaataggagagctcctgcacctgcatgtaac
agcgagggaaaagaccccaaaagtttgaaaagaagacgcggtttggactacctgtcacgt
atcccatctcctccacccatcaatcctctgaaaaccactgcttctccctgcgttaacagg
acctttaatcccccaaggagatctgtgactcccaaacctccgcagaatgaatcacctcga
gcctcacgtcccccaccaggagaggagaagtgggtgaacgatgaagagctggcgatgata
gacacccaggcgttactggaaggctga
DBGET
integrated database retrieval system
