Labeo rohita (rohu): 127177619
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Entry
127177619 CDS
T09007
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127177619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127177619
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
127177619
Endosome - Golgi transport
Arf GTPase associated proteins
127177619
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
127177619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
SAM_1
RA
PH_11
SAM_2
PH_6
PH_9
Motif
Other DBs
NCBI-GeneID:
127177619
NCBI-ProteinID:
XP_050985943
LinkDB
All DBs
Position
15:complement(38184876..38251249)
Genome browser
AA seq
1543 aa
AA seq
DB search
MSFVPPESSQPVAEWLNGLRLDQYCSAFQEAGLRTLWECQDLTSAQLQQMGVALPGHRKR
ILGSLHKLFPSAVTMEEDEEREEDRPVARERTRFKMTPDGGTTENSVAGRRPPPVPPRVT
PNRPPVPFTPGSVTTVTAPDPVGVPEQRETPTPAERSKPIPTPRPRPEHLSLKGPVQHLQ
TSERKQSPVSPTPSSSSSSSSERFHLYEQCSSPSQGEAGAPPLPPKSYAVGVSKEPRDSP
SPPPVPYRPPVPPPRASVCPRTTHPRSTSSGSPPLISSPADDPSDTDRVPHIPPRIIRPQ
SESQRRDVPPLPLKNKLDSDESSDEYDEREPSRDAKLIDMASKQMSLVVPKAAKPRYNSL
CSDDELLDDDTSCYESVSVKRGSWIEDFSPISGSQNSIYLPITGHVSAPPPRDDLASTSV
PVIKMGWLDKNPPQGSLIYQRRWVKLDTEYLRYFDTEKDIYSKRIIPTASITGVVTVGEQ
KFEVVTHNRTFLFRAESDSERSDWVVALKSCVGVSRGRTSLDMSFNPCMNYEMKGYLELR
GLRSKLYTVVCADKVFLYKNTEDYRLGIGITSIDMNVGNVKEVDRRAFDLTTPYRIFSFV
ADTDQLKDQWVEAMRDSIAEALSNYEVAERIWAEPSNQMCADCSAAKPEWAAINLAVVFC
KRCAGEHRGLGPSISKVRSLKMDKKVWTEDLIQLFLALGNERANQFWAANVPPSEALNLN
SSSEDRRRFITAKYREGKYRRYHPLFGNQKELNNALCINVQSSDVCETLALVFCGADVSC
DTGDPELPSPIVLAQHHGQNLQVEFLTQNRNTELPRSEVKVAVDRVHYMAPPSVTHNGFL
FKIASMARPITEKKGKEEFSRRWCVLNDGNFSYYESDKNATPNGGLKMKEIVCLAVNPPE
THGYDHTFELYSDAERLYLFGTDNPETMREWVKSIAKSFIPAGAEDLLLKDFERIGRLRY
KDRLNLEMSRLGWFCLVGSSLHIRLEEHTADETIDLQKLLELSIQSENEVLVLVERGRTL
YIEGERKLDFQGWAAAIQRAAGSSGDTLSQQQLTEANIPVIVERCIHFTTQYGLTSEGIY
RKSGVNSKIAALLEEFRRDARCVWLKEGEHQVDDVSNVLKRFFRDIEEGLFGQEAQNWLT
ATGFSDESSRICQYRLLFSNLPRVNQATLRALVNHLYCVQRFADLNQMNLHNLAIVFGPT
LFQADGKDYSAGRVIEDLIQHYVTIFDVNEQQLKKQLDEITYIIKLRDNLTPKAGTGSGD
FICTVYLEEKKETAEQHVKIPATMTAAELTFEILDRRKISVKEKDYWCCFEVNDKEETER
PLHYQEKVLPIFHSLGTGSHLLVKKHFSMEAMLVYLASKVEVSKHGMMKFKEERSLLGLS
TGSFNDRYFILTSTSLRLYKEIRNLQKLQSPELQYSNRPEREWPVKCLKVYHGIKKRLRP
PTCWGLTVVYESDKQEKQERQQWYLCCDTQNEMREWFATFMSIQNGGRVWPAEWLKSRAV
SRSAPLDARFGNVSLIPLRGSENEMRNSVAAFTADPLALFRNV
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcccgccggagagttcccagcctgtggccgagtggctgaatggcctccgg
ctcgaccagtactgctcggccttccaggaagccggactgcgaacgctgtgggagtgtcag
gatctaacctccgcccaactgcagcagatgggcgtggctctgcccggccacaggaagcgg
atcctcggcagcctgcacaagctcttcccctcggcggtgaccatggaggaggacgaggag
cgagaggaggacagacccgtcgcccgagagaggaccagattcaaaatgactccagacggc
ggcacaacagaaaacagcgtcgctggtaggcgaccgcctcccgtcccgcctcgggtcacg
cccaatcgacctcccgtccccttcacgcctggatcggtaaccacggtgaccgctcctgac
cccgtcggcgttcctgaacaaagggaaacgcccacacctgctgaacgatccaagcccatc
ccgactccgaggccacgcccagaacacctgtctcttaaagggccggtgcagcatctccag
acgagcgagaggaaacagtctcctgtgtcccccactccctcatcctcttcatcctcctca
tcggagcgcttccacctgtacgagcagtgttcgtctccctctcagggagaagcgggcgct
cctcctcttcctcctaagagctacgccgtgggcgtctctaaagagcccagagatagcccg
tcacctcctccggtcccctacagaccccccgttccacctccacgcgcctccgtctgcccc
aggactacacatcccagaagcacgtcatccggaagcccgcccttgatcagctctcctgca
gatgatccttcagacacggatcgagtcccacacatcccgcctcggatcatcagacctcag
agcgagagccagaggagagacgtcccgccgctgccactcaaaaacaagttggattcagat
gaaagttcagatgaatatgacgagcgcgagcccagcagagacgctaaactcatagacatg
gccagcaagcagatgtccttggtggttcccaaggcggcaaaaccccgctacaacagcctg
tgcagcgatgacgagctactggacgatgacaccagctgttacgaatccgtatctgtcaag
cggggttcatggattgaagatttctctccgatctccggctctcagaacagcatctacctg
cccatcacaggacacgttagtgctccgccccctcgggatgacctcgcctccaccagcgtc
ccggttattaaaatgggctggctggacaagaatcctcctcaggggtctctgatctaccag
cggcgctgggtcaaactggatactgaatacctgagatacttcgacactgagaaggacatc
tactcgaagagaatcataccaacagcgtccatcaccggcgtggtcacggtgggcgagcag
aagtttgaagtggtgacgcacaatcgcactttcctgttccgagccgagagcgattcggag
cggagcgattgggtggtggcgttgaagagctgtgtcggggtgtcccgcgggcggaccagt
ctggatatgtcctttaacccctgcatgaactacgagatgaagggttacctggagctgcgc
ggcctgcgctccaaactctacacggtggtgtgtgccgataaagtcttcctctacaaaaac
actgaggattatcgtctgggaatcggcatcacctccatcgatatgaatgttggaaatgta
aaggaagtggatcggagagcgtttgatctaaccacaccgtaccgcattttcagttttgta
gcagatacggaccagctgaaggatcagtgggtggaggccatgcgtgattctatcgcagaa
gcgttgtccaattacgaagtggctgagcgcatctgggcggagccgtccaatcagatgtgt
gccgactgcagcgctgccaaacccgagtgggcggctatcaacctggctgtggttttctgc
aagcgatgtgcaggagagcatcgcggtctcggcccgagcatatcgaaagtacgcagtctc
aagatggacaagaaggtctggacggaagatctcatccagctgttcctcgctctaggaaac
gaacgagccaatcagttttgggcggcgaacgtcccgcccagcgaggccttgaacctgaac
agcagcagcgaggaccgacgccgcttcatcacggcaaaataccgcgaggggaaataccgc
cgatatcacccgctgttcggcaaccagaaagaactgaataacgcgctgtgcattaacgtt
cagtcgagcgatgtgtgcgagacgctggcgctggtgttctgcggcgccgatgtgagctgt
gacaccggcgaccccgagctgccctctccgatcgttctggcccaacaccacggacagaac
ctgcaggtggagttcctcacgcagaaccgcaacacagaactcccgaggtcagaggtgaag
gttgccgtcgacagggtgcactacatggccccgccctccgtcacgcataatgggtttcta
tttaagatcgcctccatggctcgaccaatcacagagaagaagggaaaagaagagttcagt
cggcgctggtgtgtgctgaatgacgggaattttagctactatgaaagtgacaaaaacgct
acaccgaacggaggactgaagatgaaggagatcgtctgtctggctgtcaaccctcctgag
actcatgggtacgatcacacgtttgagctgtactcggacgcggagcgcttgtatctgttc
ggcactgataatccggagaccatgcgcgagtgggtcaaatccatcgcaaagtcgttcatt
cctgcgggtgcggaggatctgttgctgaaggactttgagcgcatcggccggctgcggtat
aaagacagattgaacctggagatgtcgagactgggctggttttgtctggtgggatccagc
ctacacatccggctggaggagcacaccgcagacgagaccatcgacctgcagaagctcctg
gagctctcgatccagtcggagaatgaggttctggttctggtggaacgaggcaggacgctg
tacatcgagggcgagaggaagctggatttccagggctgggcggcggccatccagagggct
gctgggagttctggagacacactgagtcagcagcagctgacggaggccaacattcccgtg
atcgtggagcgctgcattcatttcaccacacaatatggtctgacgtcagaggggatttac
cgtaaaagtggtgtgaacagtaagatcgccgctctgctggaggagttcagacgggacgca
agatgcgtttggctgaaagaaggtgaacatcaggtggacgacgtctccaacgtcctcaag
cgcttcttcagagacatcgaggagggattgtttggccaggaggcacaaaactggctcacc
gctacaggtttttcagatgagagcagtcggatctgtcagtatcgtcttctcttcagtaac
cttccccgagtcaatcaggcgacactacgagcgctagttaatcatttatactgcgttcag
cgatttgcggatctcaatcagatgaatcttcacaatctggccattgttttcggaccgact
ctcttccaggcggacgggaaggactacagcgccggtcgggtcatcgaggatctcatccaa
cactacgtcaccatattcgatgtgaacgagcagcagctgaaaaagcagttagatgagatc
acatacatcataaagctcagagacaacctcacacctaaagctggaacgggcagtggtgat
tttatctgtacagtttacctggaggagaagaaggaaacggccgagcagcatgtaaagatt
cctgccacgatgacggcagctgaactgacgtttgagattttggacagacgaaaaatcagt
gttaaggagaaagactactggtgctgctttgaggtgaatgacaaggaagaaacagagcgg
ccgctgcactatcaggagaaagttctgcccatctttcattctttgggcaccggcagtcac
ctgctggtcaagaagcacttctccatggaggccatgctggtctatctggccagtaaagtg
gaggtgtccaaacacggcatgatgaagttcaaagaggagaggagtctgctgggtttgagc
accgggagcttcaacgaccgatacttcatcctcaccagcacctcgctcagactctataaa
gaaatccggaatctccaaaagctgcaaagcccagagctgcagtatagtaatcgtccagag
cgagagtggccggtcaagtgtctgaaagtctatcacggcattaaaaagaggctccgtcca
ccaacatgttggggtctcacagtcgtctatgaaagtgacaaacaggaaaagcaggagaga
cagcagtggtatctctgctgtgacacgcagaatgaaatgagggaatggttcgctactttc
atgagtattcagaacggtggtcgcgtgtggccggcggagtggttgaagtctcgcgcggtg
agtcgctcggcaccgctggacgctcgcttcggtaacgtgtctctgattcctctgcgcggc
agtgagaacgagatgaggaatagtgtcgccgctttcacagccgatcctctcgccctcttc
agaaatgtttga
DBGET
integrated database retrieval system
