Labeo rohita (rohu): 127177624
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Entry
127177624 CDS
T09007
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lroh03110
]
127177624 (clpb)
Chaperones and folding catalysts [BR:
lroh03110
]
Heat shock proteins
HSP100
127177624 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank_2
Ank
Ank_4
Ank_5
Ank_3
AAA_5
ClpB_D2-small
AAA
Sigma54_activat
Zeta_toxin
AAA_22
Torsin
AAA_24
AAA_16
nSTAND3
AAA_3
bpMoxR
NACHT
ATPase_2
YchF-GTPase_C
ABC_tran
RuvB_N
KAP_NTPase
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
127177624
NCBI-ProteinID:
XP_050985962
LinkDB
All DBs
Position
15:38276997..38318530
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AA seq
664 aa
AA seq
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MFLSSVPARVLMRRSRSLSPCRALQTGHGEASRFRNLCELEPNRSPVASGSRASRKSVVS
EESHMQYHQLASRWRVSLEGRRSSWASLTAAGRYRDGHHSRSDSAGAAGAAGVISAAALA
FCFKKDSDDKAEALLDAARSSNTEEVIRSLAQGADPNSRHRLGWTALMVAAMNRQHNVVK
VLLEAGADPNLGDDFSSVYETAREKGVHSLEVLVSREDEFSNRLSSRASFRGCSALHYAA
LADDLRTVRMLLDAGANPLRKNDLGHTPLTYAKEGEMATLLKEAQNTFGEAQRKREAEER
RKFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQV
ARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKRLKQCPNAVVLFD
EVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNAASDEIAQHALQLRQEAQ
EQSRRRLAENLEDVQKSEKITISNTFKEQVIRPILKAHFRRDEFLGRINEIVYFLPFCHS
ELIQLVSKELNYWAKKAKQRHNITLLWERPVLDLLARGYNLHYGARSIKHEVERRVVNQL
AAAYEQELLPKGCTLRLIVDGGQQEKDGAPSLRLEVVGEDSIARKLDIRPPLNPEDVTYA
HRHH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtcttcggtaccggcgcgcgtcctgatgcgaaggtcgcgcagtctgtcgccg
tgccgcgcgctgcaaaccggccacggcgaggcctcccgcttccgaaacctctgcgagctc
gaaccgaaccggagcccggtggccagcggctcgcgagcgtccagaaagagcgttgtgagc
gaggagtcgcacatgcagtaccatcagctggccagcaggtggcgagtgagcctggagggc
cgccggagcagctgggcgagtctgaccgccgcggggcgctacagggacggacaccacagc
cgctcagactccgctggcgctgccggagccgcgggcgtcatctcagccgcggccctcgcc
ttctgctttaagaaagacagcgatgataaagctgaagctcttctagatgctgccagatcc
agtaacactgaggaggtgatcaggtcgttggcgcagggagccgatccaaacagtcgacac
cgtttgggctggacggctctcatggtggccgccatgaacagacagcacaatgtggtgaag
gtcctgctggaggcgggtgccgacccgaacctgggcgacgacttcagcagcgtgtatgaa
acggcacgagagaagggcgttcactccttagaggtgctggtgagccgcgaggacgagttc
agcaatcgtctcagcagccgcgcttctttccggggctgttctgctctgcattacgccgcg
ctggccgacgacctgcggaccgtacggatgctgctggacgcaggtgccaaccccttacgg
aagaacgacctgggacacacgccgctgacgtacgccaaagagggagagatggccacgctg
ctgaaagaggcccagaacacgtttggggaggcgcagcggaagcgcgaggcggaggagagg
aggaagtttcctctggagcgcaggctgaaggagcacatcattggacaggaaggagccatc
aatacagtggcatcagccattaggaggaaggagaatggctggtacgatgaagaacatccc
ctcgtcttcctcttccttggctcgtctggaatcggtaaaacggagctggccaagcaggtg
gcgcgatacatgcataaagacattaagaagggtttcatccggatggacatgtctgaattt
caggagaaacatgaggtggcgaagttcattggttctcctccagggtacgtgggtcacgaa
gaaggaggtcagctgaccaaacggctcaaacagtgtccgaacgccgtggttctgttcgac
gaggtggataaagctcatccagacgtgctgaccatcatgttgcagctctttgatgagggt
cgactgactgatgggaaagggaagacgattgagtgtaaagatgccatcttcatcatgacg
tccaatgcagccagtgatgaaattgcccagcatgcattgcagctgagacaggaagctcag
gagcaaagccgccgacgtctggctgaaaatctggaggacgttcagaaatctgagaagatc
accatctccaacacgttcaaagagcaggtgatccggcccatcctcaaggctcatttccga
cgggacgagtttctggggaggatcaacgagatcgtttacttcctgccgttctgtcactct
gaactcattcagctggtcagcaaagagctcaactactgggccaagaaggccaagcagagg
cacaacatcacgctgctgtgggagcgtcccgtactggatctgctggcgagaggatataac
ctgcattacggcgcgcgctccatcaaacacgaggtggagcggcgggtggtgaatcagctg
gcggcggcgtacgaacaggagctgctgccgaagggctgtacgctgcgtctgatcgtcgac
ggaggacagcaggagaaggatggagctccatctctccgtctggaggtggtgggtgaagac
agcatcgcacgaaaactggacatccgcccgccgctgaaccccgaggacgtgacgtacgcc
caccgacatcactga
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