Labeo rohita (rohu): 127177720
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Entry
127177720 CDS
T09007
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127177720 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127177720 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127177720 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127177720 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127177720 (si:ch211-11n16.2)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
Others
127177720 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
127177720 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
FYVE_CARP1-2
MMR_HSR1
AIG1
Motif
Other DBs
NCBI-GeneID:
127177720
NCBI-ProteinID:
XP_050986089
LinkDB
All DBs
Position
15:15839301..15854873
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AA seq
654 aa
AA seq
DB search
MSEMLLKDMEEISLGPVKMDEPKEDGRSFLLVDENESLQVKNETQFLQRLGCSAAQGVKV
LSIFGNTGDGKSHTLNHVLFNGEEVFATSPSPSSCTVGVWAAYEPHLNLIVLDTEGLLGA
ASQQNRRMRLLLKVLALSDVAIYRTRAERLHNDMFQFLGSASAAYLKHFTPELRALSSRC
GLDVPLSSLGPAVIVFQETFRTQLLGQDGSVLGQGDTLLQKRFHDLGQSTDAFSSVQYVG
TQTITPPTDYSQLLQIVNQQVNNTSQRAPRQPAIVFSALQALSDRFCGEISDDKISICSF
FPDEYFTCPSVCLSCNVRCKNGMNHQKDGVPHMADGLCQYAHQYNNKVLICKRCYESGRE
VIVIPKTSASSDNPWLGLAKYAWSGYVLECASCGIIYRSRQFWMGNQDPESSVVRPEVKH
VWQGTDAFQTDHQNAAQRVLDGMNYIIQSVTEYSSGPTKAVAAWLTDQVAPPYWKPNSEI
IECHGCKRAFEEAERKHHCRACGEGFCQACSTHSMPVPERGWGGTPVRVCDACYRQGGPQ
HTGQVAITEPRTLVARRVTEVAQSTLDMVSNAVDYPLCFVKGVARPDYWIPDHEITQCHS
CSKSFTPSMSKHHCRACGQGVCGNCSTKTRPVPSRGWDHPVRVCDACADSRDSL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatgctgctgaaagatatggaggagatttctctcgggcctgttaaaatggac
gagccgaaggaagatggacggagttttctcctggtggacgaaaacgaaagcttgcaggtg
aagaacgaaactcagtttttgcagaggttgggctgcagtgccgctcaaggagtcaaagtg
ctttccatcttcggcaacacaggagacggcaagtcccacactctcaatcacgtgcttttc
aatggcgaggaggtcttcgccacatctccttctccgtcctcatgcacggtgggcgtatgg
gccgcttatgagccgcacctgaacttgatcgtgctggacacggagggcctgctcggtgcc
gccagtcagcagaaccgccggatgcgtctactgctgaaggttctggccttatcagatgtg
gccatctaccgcacacgggccgagaggctgcacaacgacatgttccagttcctcggcagc
gcatcggccgcttacctgaagcacttcacgcctgagctccgtgctctgtctagccgctgc
gggctggacgtgcctctctccagcctgggacctgctgttatagttttccaggagactttt
cgcactcagctgctaggccaggatggttctgtcctggggcaaggagacacgctgttgcaa
aagcgcttccatgacttgggccagagcacagacgccttcagctctgttcagtatgtgggc
acccaaaccatcactccccccacagactactcacagttactgcagatagtcaatcagcag
gtgaacaacacctcccagcgagccccgcgacagcctgccattgtgttcagtgcattgcag
gcattgagtgacaggttttgtggcgagatctcagatgacaaaatcagcatatgctccttc
tttcctgatgaatatttcacttgcccatcagtctgtctcagttgcaatgttcggtgtaag
aacggcatgaaccaccagaaagacggggtcccacacatggctgatggattatgccagtat
gcccaccaatacaacaataaagttctcatttgtaagaggtgctatgagagcggaagagaa
gtgatcgtcatacccaaaacatctgcctcctcagataacccatggcttggtctggccaag
tatgcgtggtcaggctatgttttagagtgtgccagctgtggcatcatctaccggagtaga
cagttttggatgggcaaccaggatccagagagcagtgtggtgcggccagaggtcaagcat
gtttggcaggggaccgatgccttccagacagaccatcagaatgcagcccagcgggttttg
gatggaatgaattatataatccagtcagtgacagaatacagctcaggcccaactaaagcc
gtcgctgcctggctcacagaccaggtggctccaccctactggaagcccaactctgaaatc
attgaatgtcatggttgtaagagagcgtttgaggaggcagaaaggaaacaccactgtcgg
gcatgtggggagggtttctgccaggcctgctccactcacagcatgccagtgcctgagagg
ggctggggcggcacccccgtacgagtgtgtgatgcctgctatcggcagggaggaccccag
cacactggacaggtggccattacagaaccccggacactagtcgcccgcagagtgacggaa
gtagctcagtccactctggatatggtctccaacgcagtggactaccccctctgtttcgta
aagggagttgcgagaccagactattggatcccggaccacgagatcacccagtgccacagc
tgttctaaatccttcacccccagcatgtccaaacaccattgccgggcatgcggtcaggga
gtgtgcgggaactgctcgacgaagaccaggccagtgccctctcgtggctgggaccaccct
gtgcgagtgtgtgacgcctgcgctgacagcagggattccctgtga
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