Labeo rohita (rohu): 127177764
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Entry
127177764 CDS
T09007
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127177764 (rffl)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
127177764 (rffl)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
127177764 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
FYVE_2
FYVE
SAP
zf-RING_5
Prok-RING_4
HeH
zf-RING_2
Ish1
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127177764
NCBI-ProteinID:
XP_050986225
LinkDB
All DBs
Position
15:complement(8257409..8285290)
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AA seq
344 aa
AA seq
DB search
MWASCCGWLCLDDSTVEDTRSSTRHQAFTNSGFSSYPSPTAPEHTCKACGGRFDSLARKH
VCMDCRKSYCSRCSTQQDLQPWLCPTCQRFRGILFERAELMKLKVKDLRDYLHLHGVPTQ
MCREKEELVELVLGQQTPTSHMHIPQSTVTTQESPNTPVITTSPSVNNGTTELGPQTQTT
EDAQSLAEATAESDMDAELQVEQELQSSDSEEVLAPGRRASLSDLGSVEDIEALSVRQLK
EILARNFVDYKGCCEKWELMERVTRLYHDQKDLQNMVSNTTEGTDGGSGPAVEENLCKIC
MDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVFRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccagctgctgtggctggctctgtctggatgattccaccgtggaggacaccaga
agtagcacacgtcatcaggccttcaccaactcgggcttcagcagttacccatctcccact
gctccagaacacacgtgcaaggcctgtggaggtcgcttcgacagcctagccagaaagcat
gtgtgcatggactgcagaaaaagctactgcagccgctgctccactcaacaggacctccag
ccgtggctgtgccccacctgccagaggttccgtggcatcctgtttgagcgagccgaacta
atgaagctcaaggtgaaggacctgagggactacctccacctgcacggggtccctacgcag
atgtgccgtgagaaggaggagctggtcgagctggttcttggccagcagactcctacatct
cacatgcacattcctcagtccacggtaaccacgcaggaatcccctaacactccagtcata
acaacgagcccgtcggtgaacaatggcacaacagaactgggacctcagactcaaacaaca
gaagatgcacagagcttggctgaggcgacagctgaaagcgacatggatgctgagctgcag
gtggagcaggagttgcagtcttcagactcggaggaagtgctggctcctgggcgacgggcg
tctctctcagacctcggatcagtggaggacattgaggctttgagtgtccggcagttaaag
gagatcctcgccaggaacttcgtcgactataagggctgctgtgagaaatgggagctgatg
gagagagtcacgcgtctctaccacgaccagaaggacctgcagaacatggtatctaacacc
acagaaggaacagatggtggatctgggccggccgtggaggagaatctgtgtaagatctgt
atggactcacccattgactgtgttcttttggagtgcgggcacatggtcacgtgcacaaag
tgcggcaagcgcatgaacgaatgtcctatctgccggcagtacgtggtgcgggctgtgcac
gtgttcagatcctga
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