Labeo rohita (rohu): 127177827
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Entry
127177827 CDS
T09007
Symbol
tlr21
Name
(RefSeq) toll-like receptor 21
KO
K18808
toll-like receptor 13
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127177827 (tlr21)
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127177827 (tlr21)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127177827
NCBI-ProteinID:
XP_050986277
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All DBs
Position
16:complement(22665755..22669782)
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AA seq
984 aa
AA seq
DB search
MADSACRQLIVKAIFICLLKLAFSYSFRSCIELPDSNHVIFRCIKCYETDITTIVGDVFP
TAANLTVSRNNITYIQGQSFSHLPSLTSLVLDNNHIVNIHRDAFNNLQKLKTLNLSCNHI
SFLQRDVFNNLHNLTELLLGNNNLKSIDTFLFSNLTNLNILDLRRNHLKNFSALVECITN
LSSLIQLDLSFNSLTNLHHSSHLPNSLVRLYLSDNKLYKLGCDKSFLKYVKVLDLSDNTL
LSSKSFKGLNLKNIKYLRLRFTNVSASKLLNYTKIQPRYVDFSGLKLRDRALTSLCFHLQ
GHQISKMILQSNSIGVLNKNTFCNCASITDIMDLSRNEMKSTYCLQFLHCQNHLNTLKIE
HNHLTRLMPCNISTQLDSMKTLSYRYNRILEVSGHAFGNTPKLTNLELNINIIAYLDHKA
LWGLKDLVTLRLDNNLLTDIYSDSFKDLTSLKTLNLRNNQLSVIFDYVFQNLSNLHTLDL
GGNKITQLKLHALDGLQSLANLYLDRNRLKEIDGTLFGKLHATLQVLDLQANHILYFTEH
TYSPFINMSKLQDLKLDGQQPNGINLLPRAFFRGLISLKSLYLTNNHIIGFGAETFDDLK
SLEYLTLDNSCVGIAQLKPGIFKNLRKLKTLSTENMGIKSFSEEIFGNLTGLKQLHLNRN
AMMTLDIGLLDKLTNLTYVDIRSCPLSCNCQNSDLQNWTIGSKRLQFPYLFNITCQDQPG
SYFHSFLTNVCYLDIALYLFSSTFTFTILLTLIPLLYIKLYWKFKYGYYVFRSWFGEQWR
RLKDQKEEYKYDAFISYNSADEDWVMEQLLPNLEGSSFQLCLHHRDFELGRDIVDNIVAA
VYSSRKTICVVSQNFLRSEWCSLEIQLASYRLFQEMQDVLLLVFLEPIPERQLSTYHRMR
KVMLKKTYLQWPGSNCSDPNSAKELFWNKLKRALRSSNTGSQEKQKMKEQNDQRRQDKEG
ADREEREYFVNQTPTDDEVYYLMP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcagattctgcgtgtcgtcaactgatcgtaaaggcgatattcatctgcctccttaaa
cttgccttcagctacagtttcagaagttgcatagagctccctgattctaaccatgtaatc
ttcagatgtattaaatgttatgaaacagacataactacaattgtgggtgatgtatttccc
actgcagcaaaccttacagtttctcgcaataacattacgtacattcaaggccaaagcttc
tctcatctgcccagtctgacttctctggtactagacaataaccatattgttaacatccac
agagatgcttttaataacctgcaaaaacttaagactttgaatctgtcctgcaatcacata
tcatttctccaacgtgatgtctttaataacctacataacctcacagagctgctcctggga
aacaataatctcaagagtattgatacgttcctgttttccaatttgacgaacctgaacatt
cttgatctacgcaggaaccacctgaaaaacttttcagctttggttgaatgcataacgaac
ctatccagcttgatacaactggacctttcttttaacagtctaaccaacttgcatcactcc
agccatctgccaaactcacttgtcagactctacctcagtgataataaactatacaaactg
ggatgtgacaagtctttcctaaagtatgtgaaagtgcttgatttatcagacaacacatta
ctatcatctaagtcttttaagggcctgaacctgaagaatataaagtacctgcgcttgcgc
tttaccaatgtctccgctagcaaacttctaaactacaccaaaatacaaccaaggtatgtc
gacttctctggtttgaaactgagggatcgtgcactgacttcactgtgttttcatctgcaa
ggtcatcaaatatctaaaatgatactccagagcaattccataggagttctaaacaaaaac
acgttttgtaattgtgccagtatcactgatataatggacctctcacggaacgagatgaaa
tccacatactgcttgcagtttctgcactgtcaaaaccacctgaatactctcaagatcgaa
cataaccatctgaccaggctaatgccctgcaacatatctacacagcttgacagcatgaaa
accctaagctatcgatacaaccgcattctagaagttagtggtcatgccttcggcaacaca
ccaaaattaacaaaccttgagctaaacataaacataattgcctatttggaccataaagcc
ttatggggactcaaagatcttgtcacacttcgtctcgacaacaatcttttgaccgatatc
tacagtgactccttcaaagatcttaccagcctgaaaactctcaacctgcgcaacaaccaa
ttatctgtgattttcgactacgtctttcaaaatctgtcaaatctacatactttagatttg
ggagggaacaagatcacacagctgaagctgcatgcacttgatgggctgcaaagcttggct
aatctgtatttagacagaaatcggctgaaagagattgacggcacgctctttgggaaactt
catgccaccctgcaggtgctggatttacaggccaaccacatcctgtattttacagaacac
acatactcgccatttataaatatgtcaaagcttcaagatctgaaacttgatggacaacaa
ccaaatggcataaacttgttgccacgtgcattttttcggggtctaatttcgctgaaaagt
ctttacctcactaacaaccatatcattggattcggtgctgaaacatttgatgacctgaaa
agcttagagtacttaactctagacaactcatgcgttgggatcgcacagctcaaacctggt
attttcaaaaaccttcgaaaattgaagacattatccactgagaacatgggcattaaatca
ttttctgaagagatttttggaaatctcacaggactgaagcaactgcatctcaatcgcaat
gccatgatgactttggacatcggtttactggacaagctgaccaaccttacatacgttgac
atacgcagctgtcctctcagttgtaactgccagaacagtgacctacaaaactggaccata
ggcagtaagagactccagtttccttatcttttcaatattacatgccaagaccaaccaggc
tcatattttcacagcttcttaactaatgtatgttacttggacatagcactctacctgttt
tcttcaacgttcacattcacaattttactaaccttgataccacttctctacatcaaactt
tactggaaatttaaatacggctactatgtgttccgatcatggtttggagaacagtggcgt
cgcttaaaggaccagaaggaggaatacaagtacgacgccttcatttcctacaactcagca
gacgaagactgggtaatggaacagctgctgccgaacctcgagggttcttcgtttcaactc
tgcctccaccacagagatttcgagctgggccgtgatatcgtcgacaacatcgtggctgcc
gtatacagcagtcgcaaaacgatctgtgtggtcagtcagaacttccttcgcagcgaatgg
tgctcactggagatccagctggccagctatcgcctatttcaagaaatgcaggatgtgctt
ttgctggtctttctggagcctattcctgagcggcaactgtccacttatcaccgtatgagg
aaggtcatgctcaaaaagacttatctgcagtggcctgggtcaaattgttctgatccaaac
agtgcaaaagaactgttctggaataagttaaagagagcactaaggagcagcaacactgga
agccaagagaagcagaagatgaaggagcagaatgatcagcggagacaagacaaagagggt
gcggaccgggaggaaagagaatattttgtgaatcagacaccaacagatgatgaagtatat
tacctgatgccctga
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