Labeo rohita (rohu): 127177837
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Entry
127177837 CDS
T09007
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127177837 (dcaf13)
04121 Ubiquitin system [BR:
lroh04121
]
127177837 (dcaf13)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
90S particles
Other 90S particles
127177837 (dcaf13)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127177837 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
eIF2A
KNTC1_N
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
127177837
NCBI-ProteinID:
XP_050986298
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All DBs
Position
16:6560231..6568216
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AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETTRDIQRVPRNFDPTLHPFEVPREYTRALNATKLDRLFAKPFVA
SLDGHRDGISCITKHAKSLSTIISGACDGEVKLWNLPKRECFRTIQAHEGFVRAVCSRFC
GTSFFTVGDDKTIKQWNMEAPGYGVREEPINTILGKVVFTGIDHHQTESTFATCGQTVDI
WDEQRSSPIRSFSWGVDSFSCVRYNPVETDLLASCASDRSIVLYDTRESAPLRKVIMQLR
SNTLCWNPMEAYYFTCANEDYNLYTYDIRHLDVPVTVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPKNKGHSREVYHTKRMQHVICVRWSADNKYVLSGSDEMNIRLWKANASEKL
GLLSSREKAAASYNKKLIEKYQHHPQVRRIARHRHLPRDMLNQKRQLQEMKAARRRKEQN
VRKHSKPGSVPLLTEKEKHVAAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttgtagaaacccggacgattatgttcgagaaacgaccagagat
atacagcgagtgcccaggaactttgacccgaccctgcatccttttgaggtgcccagggaa
tacaccagagctctaaatgccaccaaactagataggttgtttgccaaaccctttgtggct
tcactagatggacacagagatggcatcagctgcatcaccaaacacgctaaaagcctttca
acaatcatatctggtgcctgcgatggggaggtgaagctgtggaaccttcctaagcgggag
tgtttcaggacaattcaggctcatgaaggatttgtacgagcagtctgttcccgcttttgt
ggcacttcctttttcacggtaggagatgacaagaccatcaaacagtggaacatggaggca
ccgggatatggagttcgggaggaaccaattaacacaattttgggaaaggtggtgttcact
ggcattgaccaccaccaaacggagagcacgtttgcaacctgcgggcagacggtggatatt
tgggatgagcagagaagcagtcccatccgctccttcagctggggtgtggacagcttcagc
tgtgtccgctacaaccctgtagagacagatcttctcgccagctgtgcatcagacagaagt
atcgtgttgtatgacaccagagaatctgcaccacttagaaaggttatcatgcaattgaga
agcaatacgctttgctggaacccaatggaagcatattattttacctgcgccaatgaagac
tacaacctttatacttatgatataagacatcttgatgttcctgtgactgtgcacatggat
catgtgtctgctgtgctggatgtggattattcacctacaggaaaggagtttgtatctgcc
agctttgacaaaagcatccgaatctttccaaagaacaaaggccacagcagggaggtctac
cacaccaaacgtatgcagcatgtcatatgtgtaagatggtctgctgacaacaaatacgtc
ctgagtggctccgacgagatgaacattcggctgtggaaggccaatgcctcggagaagctt
ggactgctctccagccgagaaaaagctgccgcaagctacaacaagaagctgatcgaaaaa
tatcagcaccatccacaggtgagacgcatcgcccgtcaccgccacctgcccagagacatg
ctgaaccagaagagacagctgcaggaaatgaaggcagcccggcgcagaaaggaacaaaac
gtccgcaaacacagcaagccgggatctgttcccctgctgacagaaaaggagaaacatgtg
gcggctgttgtggagtaa
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