Labeo rohita (rohu): 127177940
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Entry
127177940 CDS
T09007
Symbol
rims2a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 2 isoform X1
KO
K15297
regulating synaptic membrane exocytosis protein 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127177940 (rims2a)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
127177940 (rims2a)
Small GTPases and associated proteins
Rab associated proteins
127177940 (rims2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
CEND1
PDZ_2
BChl_A
FlxA
IBR
Motif
Other DBs
NCBI-GeneID:
127177940
NCBI-ProteinID:
XP_050986454
LinkDB
All DBs
Position
16:6569915..6767459
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AA seq
1498 aa
AA seq
DB search
MSAPAGPRSGPVLPEMPDLSHLTEEERKIILGVMDRQKKEEEKEQSMLKKLHQQFEMYKE
QVKKMGDEAQSTQELKSDAPTCGICHKTKFADGCGHLCSYCQTKFCARCGGRVSLRSNKV
MWVCNLCRKQQEILTKSGAWFYSGPGGALPSGASDPRRRHEEAPQEKKAKLQETPLLYQG
PLVDRSRAPGLPRQASLNNNSTLKPNDTLSNRKRSPSATRDPNQKYDQREEKAERSQYAP
GEGGMPRSPSDYGAGDRQWRGGYGRSYEDAEVARNAYRARRGGWHSQEEYPPEPGFLPDG
PPLSEHELQRQRQEEYQNRYRSDPNLARYPVKPQPYEEQMRMHAEVSRFRHERRHSDVSL
AYTEMEEPLGPLRGPHYSPGPGHTHWRSNHSPPGVDSIHRQQHLDPVSAVRKSKREKMES
MLRNDSLSSDQSESVRPPPPKPHKTKRGGKMRQVSLSSSEEELATTPEYTSCEDVEIESE
SVSEKGDSQRGKRQTFEQSHILSEGQKKMVRFGGHSLEEDAEWCEPQVKDSGVDTCSSTT
LNEEHSHSEKHPVTWQPSKDGDRLIGRILLNKRMKDGSVPRDSGALLGLKVVGGKMTESG
RLCAFITKVRKGSLADTVGHLRPGDQVLEWNGRQLQGATFKEVYNIILESKPEPQVELVV
SRPIGDIPRIPESTHAQLESSSSSFESQKMERPSISVTSPMSPGVLRDAPQYLSGQLTSQ
SLSRRIEPFNPRVQVKLWYDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDK
SKRRTKTVKKSLEPKWNQTFMYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIEL
ETALLDDEPHWYKLQTHDVSSVPLPKSSPCLQRRALHGDSPTRRLQRSQRISDSEFSDYD
CEDGVGVVSDYRNGRDLQSSTLSVPEQVLSSNHCSRSADINRARSRSPSMPPSQSHFLTL
PRTRHSQPHDSQLEELRNYGAPDRHEYHHRSRSADQRSALERPMYSRSRSTERPPDSPHM
RSSMPSLPSGHSAPPSPALSRAHPRGGSVQTSPTGTPVNSRRGRQLPQLPPKGTLERKDG
DEELEPCPGAMDVEERTRQMKLKMNKYKQGTGSDSRLEQDYHKQRSGRDPQRGENLSAKS
SDSDVSDVSAVSRTSSASRFSSMSYISVQSERPRGSRKISEFTSKMKTRQMGTAAGGNMT
KSTSIGGDMCSLEKTDGSQSDTAVGLVGTVDKKRRSSIGAKMAAVVGLSRKSRSASQLSQ
TEAGGKKLRSTIQRSTETGLAVEMRSRMTRQASRESTDGSMNSYSSEGNLIFPGVRLSSD
SQFSDFLDGLGPAQLVGRQTLATPPMGDIQIGMVEKKGALEVEVIRARGLVGKPGSKALP
APYVKVYLLENGACIAKKKTKVARKTLDPLYQQQLSFEETPGGKVLQIIVWGDYGRMDHK
SFMGAAQILLDDLDLSNMVIGWFKLFPPSSLVDPTLAPLTRRASQSSLDSGSGPFGRS
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccagccgggccccgcagcgggcctgtcctgccggagatgccggacctgagc
cacctcaccgaggaggagaggaagatcatcctcggtgtcatggacaggcagaagaaagag
gaggagaaggagcagtctatgttgaagaaattgcatcagcaatttgaaatgtataaggag
caggtgaagaagatgggggacgaagcacagagcacccaggagctgaagagtgacgccccc
acctgcggaatctgccataaaaccaagtttgccgacggctgtggccacctctgttcttat
tgccaaactaagttctgcgctcgctgtggaggaagagtttcactacgctctaacaaggtg
atgtgggtatgcaacctgtgccgaaaacaacaagaaatcctcaccaagtcaggggcctgg
ttctacagcggcccagggggcgccctgccctcgggcgcgagtgaccctcgccgccgccac
gaagaggctccgcaggaaaagaaggccaaacttcaggaaaccccactgctgtaccagggg
cctctagtggaccgcagccgagctccaggactcccgcggcaggcgtccctcaacaacaac
tccactctgaagcccaacgacaccctgagcaacaggaaaagaagcccatcagcaaccagg
gatccaaaccaaaaatacgaccaaagggaggagaaggctgagcgttcgcagtatgcccca
ggggagggcggcatgccacgatcgccgtctgactacggggccggagaccgccaatggcgg
ggaggctatggccgctcctacgaggacgcggaggtagcgcggaacgcataccgcgctcga
cggggcggctggcactctcaggaagagtatccacctgaacccggctttctccccgatggc
ccgcctctcagcgagcatgagcttcagcgccagcggcaggaggagtaccagaaccgctac
cgtagtgacccgaacctggcccgctacccggtcaaaccacaaccctacgaggaacagatg
cgcatgcatgcggaggtttcgcgattcaggcacgaacggcgccacagcgatgtctccctg
gcgtacacggagatggaggagcccttggggcccctgcggggtccccactactcaccgggt
cctggacacacccactggaggtccaatcacagtccacccggcgtggactctatccacagg
cagcagcatctggatcccgtctcggccgtaaggaagagtaaacgagaaaagatggagagc
atgttgcggaacgactcgctcagttctgaccaatcggagtccgtccggccgccgccgccc
aaacctcacaagaccaagaggggtggcaaaatgaggcaggtgtccctgagtagttcagag
gaggaattggccacaacaccggagtacaccagctgtgaggacgtggagatcgagagtgag
tctgtgagcgagaaaggggacagtcaaaggggaaaaagacaaacttttgagcagtcacac
atcttatctgagggccaaaagaaaatggtgcgctttgggggccactctttggaagaagat
gctgagtggtgtgaaccccaggttaaagactcgggggttgatacgtgcagtagcactacc
ctaaacgaggagcatagccatagtgagaagcacccggtcacatggcagccctccaaagac
ggagatcgactcatcggcaggatcctgctcaacaagcgcatgaaggacggcagcgttcca
cgcgactccggagctcttctgggactgaaagtggttggaggaaagatgacagagtctggg
cgactttgtgcgttcatcaccaaagtaaggaaagggagtttagcggatacagttgggcat
ctcagaccaggtgaccaggtcctagagtggaacggccgacagttacaaggagccacattt
aaagaagtttacaatatcattttagaatcaaagccagagcctcaggtggaactagtggtc
tcacgacccattggtgatatccccaggataccagaaagcacacacgcacaactggagtcc
agttcgagttcatttgagtctcagaagatggagcgcccctccatatccgtcacgtctccc
atgagccccggagtgctgcgggacgccccacagtacttatcgggacagcttacaagccaa
agccttagtagaagaattgagccttttaaccctagagttcaggtcaaactttggtatgac
aaagtcggccatcagctaatcgttaccatactgggtgcaaaggacctgccttcaagggaa
gacggccgaccacgcaatccttacgtgaagatctacttcctccctgacagaagtgacaaa
agcaaaagaagaacaaaaacggtaaagaaatcactagagcccaaatggaaccagaccttt
atgtattcccccgtccaccggcgggagttcagggaacgcatgctggagatcacgctatgg
gaccaggcccgagtgcgagaggaggagagtgagttcttaggagagatactcatagagttg
gaaacagcgctgctggacgatgagccacactggtataagctacaaacacatgatgtctca
tcggtacccctgcccaagagctccccctgccttcagagacgagcgctgcatggagacagt
cccacacgcagactgcagaggtctcagaggatcagcgacagcgagttctcagactatgac
tgtgaggatggtgttggcgtcgtgtcagactatagaaacggcagggacctccagagctcc
accctctctgtgcctgagcaggtcttatcgtccaatcactgctctcggtcagccgacatc
aacagagcgcggtcacggtctcccagcatgcctccttctcagagtcattttctcacctta
cctcgaacccgacacagtcaacctcatgacagtcagctggaggaactcaggaattacgga
gcaccagacaggcacgagtatcaccacaggtcccgttctgcagaccagcggtccgcgctg
gagcggcccatgtacagtcgttctcgctctacggagcggccgcccgacagcccccacatg
agatcatcgatgccctccctgccgtcaggacactccgctccaccctcccctgccttatcg
agggcgcatcctcgtggtggatcggttcagaccagccccaccgggacccctgtgaacagc
aggagagggcgacaactcccacaactgcctccaaaagggacgctggaaagaaaagatgga
gatgaagaacttgagccttgcccaggtgctatggatgtcgaggaacgaacgcggcagatg
aaactgaagatgaacaagtacaaacagggaaccggctcagattcaagactcgaacaggac
tatcacaagcagcgttcgggaagggaccctcagcgtggagaaaacctctcggccaagtct
tcggacagtgatgtcagcgacgtgtccgctgtgtcgagaaccagcagtgcgtctcgattc
agcagcatgagctacatctctgtccaatcagaacggccgcggggcagccgcaaaatcagt
gaatttacatccaaaatgaaaaccaggcaaatgggaacggcggccgggggcaacatgacc
aagagcaccagcatcggcggcgacatgtgcagtctggagaagaccgacggcagccagtcg
gacacggccgtgggcctggtgggaaccgtcgacaagaaacggcgctccagcattggagcc
aagatggcggcggtcgtggggttgagccgaaagagtcgcagcgcctcgcagctcagccag
acagaagcaggaggaaagaagctgcgtagcactatccagaggagcacagagacgggactc
gccgtagagatgagaagcagaatgaccagacaagccagccgcgaatccactgacggcagc
atgaacagctacagctcagagggaaacctcattttccctggagtgagactctcttctgac
agtcagttcagtgatttcctagatggacttggccccgctcagcttgtggggagacagacg
ttagccacgccccctatgggtgacattcaaatcgggatggtggaaaagaaaggagcccta
gaagttgaggtcatccgagccagaggccttgtgggaaaaccaggttcaaaggcactgcca
gccccttacgtaaaggtgtatctactggagaacggcgcctgcatagccaaaaagaaaaca
aaagtagcacgaaaaacactggaccctctttaccagcagcagctgtcatttgaagagaca
cctggaggaaaagttttacagattattgtttggggagactacggacgtatggaccacaaa
tccttcatgggagccgctcagatacttttagatgatctggacttgtccaacatggttatt
ggctggttcaagctgtttcctccctcttcgttggtcgacccaaccctggccccgttgacc
agaagagcttcccagtcgtctctcgacagcgggtccgggccgttcggtcgctcgtag
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