Labeo rohita (rohu): 127177946
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Entry
127177946 CDS
T09007
Symbol
cthrc1b
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127177946 (cthrc1b)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127177946 (cthrc1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
127177946
NCBI-ProteinID:
XP_050986466
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All DBs
Position
16:4979693..4995810
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AA seq
233 aa
AA seq
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MGHFKTGILIVSCLLFTCYEAEKLKTRGLRQKDVEYMEKYSSCIQGPAGIPGRDGNPGVN
GIPGTPGVPGRDGAKGEKGECVTERFEEPWKPNYKQCAWNSLNYGIDLGKITECTFTKQH
ADSALRVLFSGSLRLKCKTACCQRWYFTFNGAECAAPLPIESIIYLDQGSPEFNSTINIH
RTTSVEGLCEGLRKGLVDVAIWVGTCGDYPHGDASTGWNSVSRVIIEELPPSS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgggacactttaagactggaatattgatcgtctcctgcttattgtttacatgctacgaa
gctgaaaaattaaaaacaagaggtctgcgccagaaggatgttgagtacatggagaaatat
tccagctgcatccagggtccagcaggaatcccaggaagggacggaaatccaggagtgaat
ggaattccaggtactcccggtgtaccggggcgggatggtgcaaaaggggagaagggggaa
tgtgtgacggagaggtttgaagagccgtggaaacccaactacaagcaatgtgcctggaac
tctctcaactacggcattgacctgggcaaaattacagagtgtacgttcactaagcagcac
gcagacagcgctctccgtgtgctgttcagcggctcactcaggctgaagtgtaagacagct
tgttgccagcgctggtacttcacttttaatggggcagaatgtgccgctccgctgcctata
gagtccatcatttacctggaccagggaagtccagaattcaactccaccatcaacatacac
agaaccacgtcagttgaaggtttgtgcgaaggattgcggaaaggcctggtggatgttgcg
atctgggtgggaacctgcggcgactatccacacggagacgcctccaccggctggaattca
gtttcccgcgtgatcatagaagagcttcctccgagcagctga
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