Labeo rohita (rohu): 127177957
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Entry
127177957 CDS
T09007
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127177957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127177957
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127177957
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127177957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_11
zf-C3HC4
SGL
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
DUF7741
Motif
Other DBs
NCBI-GeneID:
127177957
NCBI-ProteinID:
XP_050986492
LinkDB
All DBs
Position
16:complement(1705179..1707210)
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AA seq
394 aa
AA seq
DB search
MSETPVPAHTRAEDVLTEIRSNLLECKVCFESFSLQKRDQTARNLPCGHVLCLKCVCALS
HPVQQKLECPFCRKLWDVGSTSECRALADLQEILLCESRPKLSTDYRGWSESLGLGTLRL
LSAFGGWGTMVNPTGMALDETSGQIVVVHDAEKRVAVFNPQGTLLNTFGRLSNICYPLDV
ALTKTGHVLVTDAGEQSLKVFTSKGRLLATIQGFQLPWGVDVDSRGRVLVSDALMGTLNQ
IVMDFSTGVVLANRVVLKELTHPRSVASCRASGNIAIVERLQASFTLRLFNSDFVPLTQV
DGFGLKLKNTLSLVISAVAFDRNGDIIVGDVQNGMVWSLGKLQKTPELTPLVSGLIRPAA
LAATASNVLVVLDSGDHVLKFYTEDAEDLYCDKK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacacccgtcccagcacatacaagagcagaagacgtcctgacagagatccgc
tcaaacctgctagagtgcaaagtgtgttttgaaagcttttccctgcagaagcgagaccaa
acggctcgaaaccttccctgcggccacgtgctctgtctcaaatgcgtctgtgccttgtcc
caccccgtccagcagaaactggagtgtcctttttgtaggaaactgtgggacgttggcagc
acctctgaatgccgtgcgctcgccgatctccaggagattctgctgtgtgaatctcgtccc
aaattgtccactgattatagaggatggagtgaaagcttaggtttggggacgctgcgtctc
ctttcggcgtttggaggatgggggacgatggtcaaccctactggaatggctttggacgaa
acatcaggacagatcgtagtggtgcatgatgctgaaaaacgagtcgctgtttttaatcca
caaggaacgcttttaaacacctttggacggctgtccaacatctgttatccactagatgtt
gcgttgaccaaaactggacacgttttggtcaccgatgctggtgagcagtcactcaaagtc
tttacgtccaaaggacgtcttctggcgaccatccaaggtttccaattgccatggggtgtt
gatgtggacagccgtggacgtgttttagtgagcgacgctctaatgggaaccctaaaccaa
attgtaatggacttttctactggtgtagttttagctaaccgagtcgttctgaaagaactg
acccatccacgttcggttgcttcttgcagagcttcaggaaacatcgcaatcgtggagcga
ctgcaagccagcttcacgttaaggttattcaatagtgactttgttcctttgacgcaggtg
gatggttttggcctgaaattgaagaacactttgagtttggttatatctgcggtggctttt
gatagaaatggagacataattgttggggacgtccaaaatggaatggtttggagtttggga
aagctgcagaaaacccctgagttgactccgctagtgagcggactgattcgtccggcggca
ttggctgcgacagcgtcgaatgtgcttgttgtcttggacagtggcgatcatgtgctcaag
ttctacaccgaggacgctgaagacttgtattgtgataaaaaatga
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