Labeo rohita (rohu): 127177959
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Entry
127177959 CDS
T09007
Symbol
scrt1b
Name
(RefSeq) transcriptional repressor scratch 1b
KO
K09219
scratch
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127177959 (scrt1b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
127177959 (scrt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf-BED
DUF7479
zf-C2H2_11
zf-C2HC_2
zf-C2H2_15
Rpr2
DUF7565
DUF7351
HypA
zf-C2HE
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
127177959
NCBI-ProteinID:
XP_050986494
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All DBs
Position
16:15116178..15119413
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AA seq
279 aa
AA seq
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MPRSFLVKKVKLDDFSSTELESAYGRSRTDLSFRIHDKGYISDYITPAVYDGESDGGTKV
PSPGPIYDGNHSDYGAPDSDQPDSPQSEITSGYINGDNAVSEGYTVDAFFITDGRSRRKV
IGGSRTLQRHTCNECGKTYATSSNLSRHKQTHRSLDSKMAKKCPTCGKVYVSMPALAMHL
LTHDLKHKCDICGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAF
KHFKCKRCNKTFALKSYLNKHYESACFKGAFSPLASVEA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggtcttttttggtgaaaaaggtgaagctagatgatttctcatccactgaactt
gagagcgcgtacggcaggtccaggaccgatcttagctttcggatacacgacaaaggctac
atcagtgactacatcaccccggccgtttacgatggagaaagtgacggcggcactaaagtg
ccttccccgggcccgatttacgacggcaaccacagcgactacggggcccctgactcggac
cagcccgacagccctcagtccgagatcacgtccgggtacatcaacggcgacaacgcggtg
agcgaaggttacaccgtggacgcgttcttcatcacggacggcaggtcccgtcggaaagtg
atcggtggctcgcggaccctccagcggcacacgtgcaacgaatgtggcaaaacctacgcg
acgtcttccaacctgagcaggcacaaacagacgcaccggagcctggacagcaagatggcc
aaaaagtgcccgacatgtgggaaagtctacgtgtccatgccagccctggccatgcacctg
cttacccatgacctcaagcacaagtgtgacatatgtgggaaagcgttcagcagaccttgg
ctactgcagggccacatgcgctcgcacacgggcgagaagccctttggatgtgcacactgt
ggaaaagcgttcgccgaccgctccaaccttcgggcgcacatgcagacccactcggcgttt
aagcatttcaaatgcaagcgatgcaacaaaactttcgcgctcaagtcctacctgaacaag
cactacgagtcggcgtgctttaaaggcgcgttctcgccgctcgcgtccgtcgaggcgtga
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