Labeo rohita (rohu): 127178016
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Entry
127178016 CDS
T09007
Symbol
adamtsl4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23369
ADAMTS-like protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127178016 (adamtsl4)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
127178016 (adamtsl4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
PLAC
TSP1_CCN
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
127178016
NCBI-ProteinID:
XP_050986585
LinkDB
All DBs
Position
16:complement(37615971..37669879)
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AA seq
1129 aa
AA seq
DB search
MTTGSVSRLCVFWCCVFAVLPLTTAEEAEKPAAGRQSRQAEEEVLEGVWGAWSEWVECSQ
SCGVGVSERRRQCMPPPQTPPHIYNRPSYPQPGVGPYSLYPVNEPPPYGAGGAERPPYFS
PPLPANPNPGLPLYRNEAGGAGPVQFGPPNQDPVSVYRSPSSSSALPYGRVPARSPNHGR
ALGSGSRRSVSPNRGTASIRRSSSSIRPGQFGYGRVPFSLPLHRQNRHTRHTRRHNTTTT
DSLDALNVNSSSHVDKTQEELEQIIPDTVARERKEHEKKIEAADVESDAASDGEPHKRME
RVREREPTVHSQPLTQRHVARDKRGDGRTSRQVPHSYTHTIHRSHTPREPPPYGLQPHTN
INPEPWVLQNAAQPSRNEAEREWRPPAATHNYRCSGHDREYRRCSLQACPGAPVNSRAEQ
CAAFNNQEFMGRVYDWEPFTEVGLEQQCELTCRPVGYRFYVRQAERVRDGTPCANNTPND
VCVGGRCLSEGCDGVLGSGLVRDRCGVCGGGDGTCERVTGSFMNTSVPLGYHKILDIPPG
ATAINITERRASPNYLALRSGTGQSVVNGRWAVDPPGEYQAGGTTFLYGRPKAGPQEQGE
ERGETLTAPGPTTAQLQLYIIFHKQNPGIDYEYYIPVEKRRDGEREVQWERERGRAALRE
ISGVSGAVENPAVSSSASLPPFSFPSSSSSSSSSSVPDRWPPERPRPQSLGPNRNARIPP
RTDLPLDNLPVFVWRRGALTECTATCGKGSQYREIVCVNRHTDQEVHERRCDSATKPVPE
EELCNIHPCPPFWDAGAWSECSVSCGRGVQQRHIQCRQSFGNRSTMVHPQRCTGLTRPNA
TQPCHPRMCSHWEISTNWSSCSVDCGVGKRTRSVRCVSDHGNTVNDRECNDRLRPQRSED
CHMGPCVTNWYFTDWTNTCSATCGPGVQRREVVCLTGGGRREGDGGVECVAEKPADMKAC
NGGPCTPTHLWYTGPWGQCNAACGNGTQRRDIICVKKTGSDFSVSAASECSHLEKPSPVQ
PCELQPCKPQWFTTEWSTCSRSCGEGKQTREVRCLTADKQHSTACDLDSEPAHERSCNTI
PCSPFEDENCKDRRHNCVTVVQARLCVYSYYKTACCASCTQSAQRAKRH
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacgactggatctgtgagcagattgtgtgtgttttggtgttgtgtgtttgctgtcctg
cccttaacaacagctgaggaagcagagaagccggcggcaggacgacagtctcgtcaggca
gaggaggaggtgctcgaaggagtgtggggtgcatggagcgaatgggtggagtgttctcag
agctgtggagtgggcgtgtctgagaggcggagacagtgtatgccacctccgcaaaccccg
ccacatatatataacagaccatcttatcctcaaccaggtgtcggaccctactccttgtat
cctgtcaacgagcctcctccatatggagcagggggcgctgagaggccaccttatttctcc
ccgcctctcccagccaatccgaatcctggattaccactttaccgaaacgaagctggtgga
gcgggtccagtgcagtttggtccacccaatcaggacccggtttcagtctaccgttcacct
tcctcatcctctgcacttccctacggaagagttcccgcacggtcgcccaatcacggcaga
gctctaggcagtgggagcaggaggtcagtttcccccaataggggcacagcatctataagg
aggtctagctcttctattcgtcctggacagtttgggtacggcagggtgccgttctctctt
cccttacacagacaaaaccgtcacacgcgacacacacgtcgccacaacaccactaccaca
gacagcctcgatgctctcaatgtgaactccagctcacatgtggataaaacacaggaagaa
cttgagcaaattattccagacactgttgctagagaacgaaaagagcatgaaaagaaaatt
gaggcagcagacgtggagagtgatgctgcaagtgatggagagccacacaaacgcatggag
agagtgcgggaacgcgagccaaccgtacattcgcagcccctgacccaaagacacgtggcc
cgcgacaaacgcggcgacggacgcacttctcgccaagtcccacactcctacacacacact
attcaccggtcacatactcccagagagcctcctccctacggcctccagcctcacacaaac
ataaatcctgagccctgggtcctgcagaacgcagcccagccctccagaaacgaagccgag
agggagtggaggcctccagcggcgacccacaactacagatgctctggacatgacagagag
taccgcaggtgcagcctacaggcttgtccaggtgctccagtaaactccagggctgagcag
tgtgcagcgttcaacaatcaagagtttatgggacgcgtgtatgactgggagcctttcaca
gaagtgggtctggagcagcagtgtgagctgacctgtcggccggtcgggtaccgtttctat
gtgcggcaggcggagagggtacgagatggaacgccgtgcgcaaataacacacccaatgat
gtgtgtgtgggaggacgctgtctgagcgagggctgtgatggcgtgttgggctcagggttg
gttcgggatcgctgtggcgtgtgcggcggtggcgacggcacctgcgagagggtcacggga
agtttcatgaacacgagtgttccgctgggttaccacaaaatcctggatatcccgcccgga
gccacagccatcaacatcacggagagacgggccagtcctaactatctggccctgcgcagt
ggaacgggtcagtctgtggttaacggacgctgggcggttgatccgccgggagaatatcag
gcaggaggaacgaccttcctgtacggccgacccaaagctgggcctcaagagcagggagaa
gagagaggagaaaccctcaccgctcctggacccacaacagcccagctgcagctatacatt
attttccacaagcagaatccaggcatagactacgaatattacatcccagtggagaaacgg
agagacggagaaagagaagtacagtgggagagagagcgaggacgggcggcgctcagagaa
atcagtggtgtctcaggggcagtcgagaaccctgctgtatcttcttctgcctccttgcca
ccattttccttcccttcctcctcatcttcctcatcgtcttcctctgtacctgatcgatgg
ccaccagagaggccccgtccacagagcttaggacccaatcgcaacgctcggattcctcca
agaactgacctcccgttggacaatctgcctgtgtttgtgtggcgaagaggcgcgctgaca
gaatgcacagctacctgtggaaaaggctctcagtacagagagattgtgtgtgtgaatcga
cacacagaccaggaggtccatgagaggaggtgtgactccgcaaccaaaccggtgccagag
gaggaactgtgcaacattcatccctgtccaccattctgggatgcaggcgcgtggtccgag
tgcagtgtttcctgcggcaggggtgtgcagcagcgtcacatacagtgcagacagagtttt
gggaatcgatcaaccatggttcaccctcagcgctgcaccggtctcacccgacccaacgcc
acgcagccctgccacccacgcatgtgctcgcactgggagatcagcaccaactggagctcg
tgctcagtggattgtggagtgggaaagagaacccggagcgtgcgctgcgtcagtgaccat
ggaaacactgtgaatgacagggagtgcaatgacaggctccgcccacagcgctctgaggac
tgtcacatgggtccttgtgtcactaactggtacttcacagactggactaacacttgttct
gcgacgtgcgggcctggagtccagcgcagagaggtggtgtgtttgaccggtggaggcagg
agagaaggagacggaggagtggagtgtgtggcggagaaaccggctgatatgaaggcctgt
aatgggggtccctgtacacccacccatctttggtacactggaccctggggacagtgtaat
gcagcgtgtggaaacggcacccagcgcagggacatcatctgcgtgaagaagacgggaagt
gacttttccgtgagtgctgccagtgagtgctcccacctggagaaaccgtctcccgtgcag
ccgtgtgaactgcagccctgcaaaccacagtggttcaccaccgaatggagcacgtgctct
cggtcctgcggtgaaggcaagcagacgcgggaggtgcggtgcctcacggctgacaaacag
cacagcacagcctgcgatctggactcagagcctgcgcatgagcgctcctgtaacaccata
ccctgcagtccctttgaagacgagaactgtaaggacagacggcataactgcgtcacggtg
gtccaggctcgactttgcgtctactcctactataagaccgcctgctgcgcgtcctgcacc
cagagtgctcagcgggccaaaagacattaa
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