Labeo rohita (rohu): 127178135
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Entry
127178135 CDS
T09007
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127178135 (clstn3)
Cell adhesion molecules [BR:
lroh04515
]
Cadherins
Cadherin related
127178135 (clstn3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
DUF5570
Motif
Other DBs
NCBI-GeneID:
127178135
NCBI-ProteinID:
XP_050986771
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All DBs
Position
16:complement(22902740..22929467)
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AA seq
956 aa
AA seq
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MARMSFLSFLLFCLTSVAHGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPGGSGSAQFEAVVLDRSTGEGLVRSKEPLDCESQKEHSFTIQAYDC
GEGPDGTNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEAVDADCS
PQYSQICFYDIITPNVPFTIDNDGNIKNTEPLDSKRQRVHSFWVTAFDCGKNRAQADAQV
IVTVKPSCKPGWIGWTKRIEYTPGSGSIPLFPNLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPATNWTAALPTLPSSDSSLVFSFNGSTHVAV
VPDSVASAVSGDHFTLQLWMRRGGASIQSLANQARGTRKEEETIICSTVKNDDSYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPHQRLVIGACWEPEEKPRDIVNNTMPEIKDTGRFVSGYKGLLSGVTVRP
GNVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFSEESCLSLRQLEGYLVVLQPDAPQISLSGVGPHLAR
PAAEFEGPQGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMEALKERGLDIINTTAYIAITGAESISVYEDVLRSIRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHTGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGARGGGKEGSNQWDDSALT
IIVNPMETYENRMGIATDMDGECDDEEEVVDSPDDTSDDQRIIIKKEGKDSAPRRY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatgagttttctctcctttctcctcttttgcttgacttcggttgcccatggc
aacaaagccaataaacacaagccatggatcgaaacggagtaccaagggatcgtcatggaa
aacgacaacactgtcctcctcaacccacctctgtttgccctggataaagacgcaccactg
cactacgcaggggagatctgcgggtttagggttcataacggaccaggtggttctggttcg
gcacagtttgaggcggtggtgttggatcgctccactggagaaggtctagttcggtccaag
gagcctctggactgtgaaagccagaaggagcacagctttaccatccaggcgtatgactgc
ggtgaaggtcctgacgggactaacagcaagaagtctcacaaggctactgtgcatgttcgt
gtaaacgacgtgaacgaattctcacctgtctttgtggagcgtcggtacgaggcgtcagtg
cccgagggtcgtctgtttgatcgtatcgtgcgagtggaagccgttgatgccgactgctca
cctcagtacagccagatctgcttctatgacatcatcacgcccaatgtccctttcaccatt
gacaacgatgggaacataaagaacactgagccactggactccaaacgtcagcgtgtccac
agtttctgggtgacggcatttgactgtgggaagaatcgagctcaggctgatgctcaggtc
atagtcacagtcaaaccttcctgcaagccaggctggattggatggacaaagcgcatcgag
tacactcctggttctggcagtatccctctcttcccgaacctgcacttggaaacctgcgag
gagacggtttggaacatccaggctactgttgaacttcaaacgggtcatattgggaagggc
tgtgacagggacagctactccgatcgatctgtgcgcagactctgtggcgctgtgaggggt
gaagttgacctccttccgcctccatctcctgcaaccaattggaccgccgcattgccgact
ctaccatcttctgattcatctctggtgttctccttcaatggctccacccatgttgctgta
gtacctgattcagtggcttcagcagtgtccggtgaccacttcactctgcagctgtggatg
cgaagaggaggggccagcattcagtcactggccaaccaggcgaggggaacccgtaaagag
gaggagaccattatctgcagcactgtaaagaatgatgactcgtactctcactactcttta
tcggtacatggctgtcgtctctctctcttctattggccggatgtgtccgctgccagacct
gtcaaattcctttggaaactggagcaggtgtgtgacagcgagtggcatcacctgtccctc
agtgtgcagttcccctctgtcacgctctacgtggatggcgtgacctttgaccccgcactc
atccatgacaacggagccatccctaaccccgcaccgcaccagcggctggtcatcggagcc
tgctgggagccagaagagaaaccgagagacattgtgaacaacaccatgccagagattaaa
gacacagggaggtttgtcagtggatacaaagggcttttgtcaggagtgactgtgcgtcca
ggaaatgtggagccccacagtgtggtggagtgtctgtatgcgtgtcgagaggggcttgat
ttcggagaccttgagactttgggctcaggcatgaaggtgcacgtgaaccctagccagtct
gtgctggtgttagaaggagacgacattgaaagtttcaatcgtgctgttcagcaggtgaca
tacaggaactctctacgattcgccacacctggtgtccggccactcaaactgacaacctct
ctcaggtgtttcagtgaggagagctgtctctctctcagacagctggagggttacctggtc
gtgctccagcccgacgcccctcagatctctctctctggggtgggaccccacctggcccgg
ccagccgccgaatttgagggccctcaaggggttcccttgtttcctgagctccgtatcgtc
tgctccctgtctcatgctgtgaacacagctgctcagggcatggaagggggcgcactaatg
tcagatgctgtggctcatactctggatggttgtgaagtccagcccttgggggaggagcta
aacccagaaagggaggagcttctggttgacatggaggcattaaaagagagaggactggac
atcattaacacaacagcctacattgccatcactggagcagagtctatctctgtgtatgaa
gatgtgttacgctccattcgctatcgcttagcaaagggctctgctcgttttgaaagaagg
ttccgtctgtcgtgctcagaaatgaatggccggtacacgagcaacgagctcacgcttgag
gtgaacttcctgcactctctggacagtctgtaccatccgtctcatctgctggcatctcag
cagcagttcctccacccatcccatcacactggggaactgagtggacacacactccccaac
ccacaccgcaattcagttgttccaggagccgcaactgtcatcatcatggtgtgcgtgggt
ttcttggttgtcatggtgattcttggtgtcttccgcatccgttccatccaccgtcgtggt
gaaggagcaagaggaggaggcaaagagggcagcaaccaatgggacgattcagccctcacc
atcattgtgaacccaatggagacatacgagaaccgcatgggaattgcaacagatatggac
ggagagtgtgacgacgaggaagaagtagtggattcgcctgacgataccagtgatgaccag
cgaatcatcatcaagaaagagggaaaagactccgcccccagacgctactga
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