Labeo rohita (rohu): 127178158
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Entry
127178158 CDS
T09007
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178158
Membrane trafficking [BR:
lroh04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127178158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
127178158
NCBI-ProteinID:
XP_050986807
LinkDB
All DBs
Position
16:374149..404730
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AA seq
1507 aa
AA seq
DB search
MTEERCPQLVDYFVVAGLTGDSSPLDEEGQQRGVRAVQPVTDLAVIARGLGEDVPEGFTC
IEKTQGGHPAELSAGLLNNPHMFLCYRRGHDKPPIEELGVLYEGKDPVRPGWQVIETTPY
SRSASLSSGGPATHRTFLMFRRAPDSQALNTLGVTEISLLMPSKGETAPHTYCRVDKNLN
TGMWGPALYLCYKRSVAKANALVYEAGLISRYPEEDLESFPLPDSVPVFCLPMGVAVESW
PLNTKYQLPIFSTFVLTSASGDKVYGAAIQFYEAYPRESLSERQCVRLGLLSVVDRRPIT
NRSVQVKKSICVLSHWPFFSVFQKFLTFIYRYSISGPHVLALEKHISSFMHNVPFPSAQR
PRILVQLSPYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACSLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMAFPLRWPCPYIPLCPLRMADVLCAPMPFIVGVHSSYFDLYDPPSD
VVCVDLDTNTIFQSEDKKPLSWRSLPRKHGKILLNSLTNLHKTLEKIYTPGQEEATLEFL
LTDYDLIYGRQKLLELEIQEAFLRFMSCLLRGYRSFLLPITQAPSDRTTDCSSLFNLQGF
LKSRDRAQQKFYTQLTKTQMFTQFIEECSFVSDRHGCLEFFDECVQKVDVEKPEDVRLID
RDECHSGEHTVFIMPPEEPQEADGSECPAHYSYDTFPILQSDLFDRPQDQLRTPAKGSAP
SSPAPRRTKQEIKLAQKKAQKYSTVPDMWSKCLLGHCYGLWFIYLPTFVKAESTKVRTLH
AAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKRAGITPNTITYGYY
NKAVLESKWPSTNQGGRLRWAKLRNVVLAVAQFRQPIKQQQRSASFSTRAGQRDAPPPAR
DRQPSASSHSHILLLFTEDVLSKPRPHSALIRQSSWSGLSESSSHESLTSLAKSNSLSSV
QASGSKVKLSKKAAAQTAAANAAAASRKPPAGRRDTLSPPAPVLVRRSDICLSTFYRDCA
ETADADCRCQPERDSRSVEVRETLNRKSVDENYNNVSSPSRGLAGKLQQLLTPTRNRTSV
RRAASVDDRRVGANGHSRRTSEQKLSRKNQMAESLLKAKERLYNATSESSLSVGSDIDMT
DIQTLAVPLRKSWDSSQEGAGIEVLMSSCSLCRSCNSLVYDEEIMAGWSSDDSNLNTTCP
FCSAPFVPLLNAEICDLGPVCSVERNNLSAEDELENAMRPPAGPDDALQHLCNGVRETDS
SSETSSQSESSVPSVGGAPQVTVAYLSPLVLRKEMESLLENEGEAVLSQVQLLDSHSILF
WNLVWYFTRLGLPSNLLQLLRTSPLTARLAQGSEGAGVRVKLLWDTLTPDTEQWPPLYML
WRIHSGVPMRSHNWRHHNHPFSLGFLEEVLRWVGMNEVHKAITLFLDAVAKQPGTPRIQR
SLYREMLFLTLAAMGKDHVASFDKRYKAAYVRLSGSLGREELRRKRVQPPSPKAVDCRRC
FLLPLEC
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagagcgatgtcctcagctggtggattatttcgtggtggcgggtctgacgggc
gactcgtctccgctggacgaggagggtcagcagaggggcgttcgagccgtgcagcccgtc
accgatctggccgtgatcgcccgcggcctcggggaggacgtcccggagggattcacctgc
atcgagaaaacgcaaggaggccatccggcggagctgagcgccggcctgctgaacaacccg
cacatgttcctgtgctaccggagaggacacgacaaaccgcccatcgaggagctcggtgtt
ctgtatgagggcaaggatccggtcaggccagggtggcaggtgatcgagacgaccccgtac
agccgttcggccagtctgagctccggcggccccgcgacccaccgcaccttcctgatgttc
cgcagagcgccggactcgcaggcgctgaacacgctgggcgtcaccgagatctcgctgctg
atgcccagcaagggcgagacggcgccgcacacctactgcagagtggacaagaacctcaac
actggaatgtggggtccagcgctgtacctctgctacaagcgttcagtggcaaaagcaaat
gctctggtgtatgaggcaggtctgatcagtcggtatcctgaggaggatctggagtcgttt
ccactgccggactctgttccggtgttctgtctgccgatgggtgtggcggtggagagttgg
ccgctcaacaccaaataccagctgcccatcttctccacatttgtcctgaccagcgcctct
ggagacaaggtgtacggcgccgctatccagttctacgaggcgtacccgcgcgagtctctg
tccgagcgtcagtgtgtgcgtctgggtctgctgagcgtcgtggaccggcggcccatcacc
aaccgcagcgtccaggtcaagaagagcatctgcgtcctctcgcactggcccttcttcagc
gtcttccagaagttcctcaccttcatctacagatactccatctctggaccgcatgtgctg
gcgctggagaagcacatctcgagcttcatgcacaacgtcccgttcccgtctgctcagcgt
ccccgtatcctggttcagctgtctccgtatgataacctgctgctgtgtcagcccgtgtcg
tctccgctgccgctcagtggtgcgagtttcgtgaagctgctgcagaatctgggtccggag
aacgcgtgttcgctgctgctggccgtcctgaccgaacacaagctgctgctgcactcgctg
cggcccgacgtgctgacgtccgtcagtgaagcgctcgtctccatggcgtttcctctgcgc
tggccctgcccgtatatcccgctgtgtccgctgcggatggcagacgtgctgtgcgcgccc
atgcccttcatcgtgggcgtccactccagctacttcgacctgtacgacccgccgtctgac
gtggtgtgtgtggatctggacaccaacaccattttccagtctgaagataagaagcctctg
tcctggaggtctttgccgagaaaacatgggaagatcctgctgaactccctgaccaacctg
cacaaaactctggagaagatctatacgccgggtcaggaggaggccacgctggagttcctg
ctgacggactacgatctgatctacggccgtcagaagctgctggagctggagatccaggag
gcgttcctgcgcttcatgagctgtttgctgagaggatacagatccttcctgctgcccatc
acacaggcgccgtccgacagaaccacagactgcagctcgctcttcaacctgcagggcttc
ctgaagtcacgcgatcgagcgcagcagaagttttacactcagctcacgaagacgcagatg
ttcacgcagttcatcgaggagtgttcgttcgtcagcgaccggcacggctgcctcgagttc
ttcgacgagtgcgtgcagaaggtggacgtggagaagccggaggacgtgcgtctgatcgat
cgggacgagtgtcacagcggtgagcacacggtgttcataatgcctccggaggagccgcag
gaggccgacggatccgagtgtcccgcgcactacagctacgacacgttcccgatcctccaa
tcggatctgttcgatcggccgcaggatcagctgcggactccggctaaaggaagtgccccc
agtagccccgccccccggcgcaccaaacaggagataaagctggcgcagaagaaggcgcag
aagtactcgacggtgccggacatgtggtccaaatgcctgctgggtcactgctacggcctc
tggttcatctacttacccacgtttgtcaaagcagagagcactaaagtgcggacgctgcac
gccgcatacgaggtgctcaaacacatggagacgcgcaaagtggtgctgccggacgaggtg
tgttaccgtatcctcatgcagctgtgcggtcagtacggtcagccggttctcgcggtcaga
gttctgctggagatgaagcgggcgggaattacacccaacaccatcacatacggatactac
aataaagcggtgctagagagcaaatggccatccaccaatcagggagggcgtcttcgctgg
gcgaagctgcgtaacgtggtattggccgtggctcagttcaggcagccaatcaaacagcag
cagaggagcgcgtcgttcagcacccgcgcaggtcagagagacgccccgcctccggcacgt
gatcgacagccgtcggcatcgtcacattctcacattctgctcctgtttacagaagacgtg
ctgtccaagccccgcccccactcggctctgattcgtcagtccagctggagcgggttgagc
gaaagctcgagccacgaatcgctgacgagtctggccaagagcaacagtctgagcagcgtt
caggcgtcaggaagcaaggtgaagctgtcaaagaaagcagcggcgcagacggccgcagcc
aacgcggccgcagcctcacgcaaacctcccgccggccgccgcgacacgctgagtcctcct
gcgcccgtcctggtgcgccgcagcgacatctgcctgtccaccttctacagagactgcgca
gagaccgcagacgcagactgcagatgtcagccggagagggacagcaggtcggtggaggtg
agggagactctgaacaggaagtcggtggatgagaactacaacaacgtttcgtccccgagc
cgcggtctggccgggaaactgcagcagctgctgacgcccacgaggaaccgcacgtccgtg
cgacgggccgctagcgtggacgaccggcgggtgggagcgaacggacactcgcgccgaacc
tcagagcagaaactctcacgcaagaaccagatggccgagagtctgctgaaggccaaggag
cggctgtacaacgccacgtctgagagttctctgtctgtagggagtgacattgacatgact
gacatccagacgcttgcggttcctctcaggaagtcatgggattcttcacaggaaggggcg
ggcattgaggtgctgatgtcgagctgctcgctgtgccgcagctgtaattctctggtgtac
gacgaggagatcatggcgggctggtcgtctgatgactccaatctcaacaccacctgtccg
ttctgctccgcgccgttcgtcccgctgctgaacgcagagatctgtgacctgggccccgtc
tgcagcgtggagcgcaataatctgagcgcggaggatgagctggagaacgccatgcgacct
cccgcaggtccggacgacgcactgcagcacctgtgcaacggcgtcagggagacggactcc
agctccgagaccagcagccaatcggagagcagcgtgccgtcggtgggcggagccccgcag
gtgacggtggcgtacctgagcccgctggtgctgcggaaggagatggagagtctgctggag
aacgagggcgaggccgttctctcgcaggtccagctgctggacagtcactccatcctcttc
tggaatctggtgtggtacttcactcgcctcggtctgcccagtaacctgctgcagctgctg
cggacgtcaccgctgaccgcacgcctcgcgcaggggtcagagggcgcgggggtgcgcgtg
aagctgctgtgggacacgctgaccccggatacggagcagtggccgccgctctacatgctc
tggaggattcacagtggcgtccccatgcgcagccacaactggcggcatcacaaccatccc
ttcagcctcggcttcctggaggaagtgctgcgctgggtcggcatgaacgaggtacacaag
gccatcacgctcttcctggatgcggtcgctaagcagcccggcactccgcggatacagagg
agtctgtacagagagatgctcttcctcacgctggctgctatgggaaaagatcatgtcgct
tcgtttgataagcgttataaggcggcgtacgtgcgcttgagcggttctctgggtcgagag
gagctgaggaggaagagagtccagccgcccagtcctaaagccgtcgactgcagacgctgc
ttcctgctgccgctggagtgctga
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integrated database retrieval system
