Labeo rohita (rohu): 127178163
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Entry
127178163 CDS
T09007
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127178163 (wdtc1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127178163 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
TPR_19
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_RIG_2nd
TPR_2
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC3
Beta-prop_WDR35_TULP_N
TPR_1
TPR_17
Beta-prop_WDR19_1st
TPR_16
TPR_6
Barstar
TPR_9
Motif
Other DBs
NCBI-GeneID:
127178163
NCBI-ProteinID:
XP_050986816
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Position
16:776612..798052
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AA seq
674 aa
AA seq
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MTCCETMSLRNVTSDLLRRQIRENRALDFQRHYHVTDPFIKRLGLEAELQGHSGCVNCLE
WNERGDLLASGSDDQHAIIWDPFRHTKLITMHTGHAANIFSVKFLPHSEDRILITGAADT
KVHVHDLTAKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGVIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNHRKSMSQSTSAGVHT
FCDKRKSIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQRPYTFLLPKKCHTSSEVQNGKTTNGVSNGIHLPASRLKLAKVSSGSSDLPPHL
ERIKQQANDAFARQQWTQAIQLYSLGIHEAGHNAMLYGNRAAAYMKRKWDGDHYDALRDC
LKALSLNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKAA
LFSKTTDSSDDKKGNNSIRFHNFSRKESIPEDEIVMRERSFDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPESENENCRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLSSRGAEGSD
DEESSDSHVQCRSS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgctgtgagaccatgtccctgcggaacgtcacgagcgatctcctgcgccggcag
atccgggagaaccgggctctggacttccagagacactatcatgtgaccgacccgtttata
aagcgtctggggctggaggccgaactacagggtcactccggctgcgtcaactgtctggag
tggaacgagagaggagatctcttggcctccggttcggatgaccagcacgccatcatctgg
gatcccttccggcacaccaagctcatcactatgcacacgggacacgcagccaacatcttc
tcagtgaagttcctgcctcactccgaggaccgaatcttaatcacgggagccgccgacacc
aaggtgcacgtgcacgacctgacggcgaaggagaccattcacatgttctcggatcacacc
aaccgcgtcaaacgcatcgcgacggctcccatgtggcccaacaccttctggagcgcagct
gaggacggggtcatccggcagtatgatctgagagaaagcagtaagcgatcagaggtgtta
atcgatctgacggagtattgcgggcagctcgtggaagccaaatgtctggccgtcaaccct
cgtgacaacaactacctggctgtgggagccaacgggcccttcgtccgcctctatgacatc
agaatgatccacaatcacaggaagtcaatgagtcagagtacctcagccggcgttcacacg
ttttgcgacaagcggaagtcgataccggacggcgctggacagtactatgtcgcaggtcat
ttaccagtaaagcttcctgactataataacagattacgagttctggtggccacctacgtt
actttcagtcctgacggcactgaactgctggtaaacatgggtggagaacaggtgtattta
tttgatttgacgttcaaacaaaggccgtacacctttctgctgcccaaaaaatgccacacg
tcatcggaggtacagaacgggaagacgaccaacggcgtgtccaacgggattcatcttccc
gccagccgcctcaaactggcgaaggtttccagtggctctagtgatcttcctcctcatctg
gagcggatcaagcagcaggctaacgacgcgttcgcacgacagcagtggactcaagccatt
cagctctacagtctgggcatccacgaggccggacacaacgcaatgctgtacggaaaccgc
gccgcggcgtacatgaagagaaagtgggacggtgatcactacgacgccctgcgggactgt
ctgaaggccttgtctctgaacccgggtcatctgaaggcgcatttccgtttagcgcgctgc
ctgtttgagctcaagtacgtggccgaggctctggagtgtctagatgacttcaagggcaag
tttccggagcaggcgcacagcagcgcgtgcgacgcgctcgacaaagacatcaaggcggcc
ctcttctccaaaactacagactcctctgatgacaagaaggggaacaactccatccgcttc
cacaatttcagccggaaggagtccatcccggaggacgagatcgttatgagagagcgaagc
ttcgattacaagcatcgctactgtggccactgcaacaccaccactgatattaaagaagcc
aacttctttggaagtaaaggtcagtacattgtgagcggttcagacgacggctcgtttttc
atctgggagaaagagacgacgaacctggtgcggatcttacaaggagacgagtctatagtg
aactgcctgcagccgcatcccagctactgcttcctggccaccagcggcatcgaccccgtg
gtgcggctctggaaccccagaccggagtcggagaacgagaactgtcgggtggtggaggac
atggagggcgcggctcaagccaaccagaggcgcatgaatgcggatccgctggaggtgatg
ctgctgaacatgggctaccgcatcacgggtctgagcagcagaggcgccgagggctcggat
gacgaggagagctcggatagccacgttcagtgccgctccagctag
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