Labeo rohita (rohu): 127178165
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Entry
127178165 CDS
T09007
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127178165 (khdc4)
Spliceosome [BR:
lroh03041
]
Complex B
Other components
Prp19-related factors
127178165 (khdc4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Motif
Other DBs
NCBI-GeneID:
127178165
NCBI-ProteinID:
XP_050986820
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Position
16:complement(190796..200628)
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AA seq
613 aa
AA seq
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MAEVTQLLCFRWLVRLLERQERIGSVRLIAIRNINSTRQMSFGVPHGGGRRSKWDQAGPV
SSGEADGGSAPTGALDAAAAVAAKINAMLVAKGKLKPSQISSAAPTDKVAGVGGNKVKDD
LVVAEVEINDVPLTCRNLLTRGQTQDEISRVSGAAVSTRGRYMTAEEKSKALPSDRPLYL
HVQGQTRDLVDKAVNRIKEIITNGVVKAATNSSYSGATVTVYQQPGPAPPPTIPPAAHKA
HYPGGMHYVQDKVFVGLDQAVQGFCVKERVEGPGCSYLQHIQAETGAKVFLRGKGSGCLE
PASGREAFEPMYIYISHPKPEGLAAAKTLCENLLQTVHAEYSRFLNQMSSVMPTQGFIQP
PAVNGIPPQPPYYPPAGFQPSYPAPVPPPQPVAPQYPVAPAAPAPVPPPTGQYPITPAPA
SVPAQTLPPAPFPPAAPAPPKPSAPSNPPQKRRFTEEVPDEADSGLLGYQHGPIHMTNLG
AGMSVGSSEASGPLSAASSGPVRERDSSSRLMPPPCAPAPVNGPRAQKADEKTPAPSLLE
PQVKRARTGLVAYAGDSSDEEDDHGPSKAAGAAGNAASGWTYRCPSSPPSRPKTQTPQTQ
TTQQQPMPFWMAP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtgacgcagttgctgtgtttccggtggctggtccgtctactcgagcgtcag
gagcggatcggttcggttcgattaatcgcaatcagaaacataaactccacacgtcagatg
tcgttcggtgtcccgcacggcggcggccggcgcagtaaatgggaccaggccggtccggtg
tcgtctggagaggctgatggaggttcggctccgaccggagctctggacgctgccgccgcc
gtcgccgctaagatcaacgccatgctggtggccaaaggcaaactcaaaccgtctcagatc
agcagcgctgctcccacagataaagttgcaggtgttggtggtaataaggtgaaagatgat
ctggtggtggccgaagtggagattaacgacgtcccgctcacctgtcgaaatctgctgacc
cgcggacagactcaagatgagatcagcagagtgagcggtgcagccgtgtccaccagagga
cgttacatgacagcggaggagaagagcaaagcgctgcccagtgaccgtccgctgtatcta
cacgtccagggacaaaccagagacttagtggacaaggccgttaaccggataaaagagatc
attactaatggtgtagtgaaagcagccactaactcaagctacagtggagcgacggtcacc
gtttaccagcagcctggacccgctcctccacccacaatcccccctgccgctcacaaagca
cactatccaggaggaatgcattatgtgcaggataaggtgtttgtgggtctggatcaggcc
gtccaggggttctgtgtgaaggagcgtgtggaggggcccggctgctcgtacctgcagcac
attcaggccgaaaccggtgccaaagtcttcctaaggggcaaagggtccggctgcctggaa
cccgcgtccggacgagaggccttcgagcccatgtacatctacatcagtcacccaaaacca
gaaggacttgctgctgcaaaaaccctgtgtgaaaacctcctgcagaccgttcacgctgag
tattctcgattcctgaatcagatgagcagtgtgatgcccacacagggtttcattcagcct
cctgccgttaacgggatcccgccgcagcctccgtattaccctcccgcgggcttccagccg
tcctatcccgcccccgtcccgccgcctcagcccgtcgctcctcagtatccggtggctcct
gcggctccggcccccgtcccccccccgaccggacagtatcccatcactcccgcgcccgcg
agcgtcccggcacagactcttcctcccgctccgtttcctcccgccgcgccggctccgccc
aaaccctcggctccgtccaacccgcctcagaaacggcgcttcacggaggaggtgccggac
gaggcggacagcggcctgctgggatatcagcatggacccattcatatgactaatttaggt
gcaggcatgtctgtgggcagctctgaggcgtcaggacccctgtctgctgcttcctcgggg
cctgtgagagaaagagacagtagcagcagactcatgccgcctccgtgcgcaccggcgcca
gtcaacgggccgagagctcagaaggccgacgagaagacgccagcgccgagcctcctggag
ccgcaggtgaagcgcgcacggacggggctggtggcgtacgccggcgactcctccgacgaa
gaggacgaccacggaccctccaaagcggccggggcggcaggtaacgcggcctcgggatgg
acgtaccgctgcccgtcgtcgccgccctcgcggcccaaaacgcagacgccgcagacgcag
acgacgcagcagcagcccatgcccttctggatggcaccgtaa
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