Labeo rohita (rohu): 127178210
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Entry
127178210 CDS
T09007
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5 isoform X1
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127178210 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127178210 (grik5)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127178210 (grik5)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GyrI-like
Motif
Other DBs
NCBI-GeneID:
127178210
NCBI-ProteinID:
XP_050986887
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Position
16:22367175..22454798
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AA seq
1067 aa
AA seq
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MPELPALLLSIYFRFLLVTVVTMPPSSLSQTPVLSSVRMAAILDDSSVCGRGERLALALA
RENINSVMEGPARARVEVDIFELQKDSQYETTDTMCQILPKGVVSVIGPASSPASGSIVS
HICGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAIGAILRSFSYPSASLVCAK
AECLLRLEELIRRFLISRETLSIRMLDDNLDPTPLLKEIRDDKIATIIIDANASISYLIL
KKASELGMTSAFYKYILTTMDFPLLWLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLS
WREGCDINPYPGPALSSALLFDAVHVVVSAVQELNRSQEIGVKPLSCTSPQIWQHGTSLM
NYLRMVEYDGLTGRVEFNSKGQRTNYTLHILEKHRGGHKEIGIWYSNNTLLMNSTSLDIN
VSETLANKSLIITTILENPYVMRKMNYQEFEGNEQYEGFCVDMLRELSDILKFTYRIKLV
DDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRV
HIGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLSARLSPYEWYNPHPCLRERRDLLE
NQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQR
MEVPIESPDDLADQTNIQYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEE
GIARVLNSKYAFLLESTMNEYHRSLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEISLAVL
QLQENNRLEILKRRWWEGGQCPKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEFV
WSTRRSAETDEVRPLSCDRQYHSHTTVSVCQEMLTEFRNAVSCKKSSRLRRRRPLSSSLA
LRHPTRITLGAPRPLRLVREMRLSNGKLYSGTGPLTGSSGPVGGPSDMGPGPQRLLEDPL
GANSTPTVALGPPAVTVPLPRGCTHVRICQECRRIQSLRTTSCTRIPPSSAPLPRLAPPP
PHSSSNTDSEGGGGPSPCRIGHSPPAKGCTLPPPQSSNNTDLMGEQK
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagcgctcctgctgtcgatttacttccgcttcctgttagtcaccgtg
gttaccatgccgccttcttccctgagccagacccctgttctgtcatctgtacggatggcg
gcaattttggatgacagctctgtctgtgggcgtggggagcggttagctttagcgttagca
cgcgagaacatcaacagtgtgatggagggcccggctcgtgctcgcgtggaggtcgatata
tttgaactccagaaagactctcagtatgagactacagatactatgtgccagattctacca
aagggcgtggtctcagtgattggccccgcctccagtcccgcctctggctctatagtcagt
cacatctgtggggaaaaggagattcctcatgtcaaaatcggtccggaagagactccaagg
cttccttacctgcgctttgcgtctgtgactctgtatcctagcaacgaggatctgagcctt
gccatcggagccatcctacgctccttcagctacccatcggctagtctggtctgcgctaag
gccgaatgtctgctgagactggaggagctgataaggcggtttctgatctctcgagagacg
ctgtcaatcaggatgctggatgacaaccttgaccccactcctttgctgaaggagattcgt
gatgacaaaatagctacaataattattgatgctaatgcatctatatcttaccttatactg
aaaaaggcatcagagttgggaatgacatcagcgttttacaagtacatcctcacaactatg
gacttcccactgctatggttggatgatatagtggatgagcagtcaaacattgtgggcttc
tcgatgtttaacaccacccacccgttttacctggagtttatcaggagccttaacctgtcc
tggagagagggttgtgacattaacccgtaccccggaccagcgctgtcgtcggccctgctg
tttgatgcggtccatgtggtggttagtgcagtgcaggaactcaaccggagtcaggagatt
ggcgtcaaacctctcagctgcacctcccctcagatctggcaacatggaaccagcctcatg
aactacctgcgtatggtggagtatgacggtttgacaggtcgagttgagttcaacagtaaa
ggccagaggaccaattacaccctccacatcctggagaagcacaggggaggccacaaagag
attgggatctggtactctaataacactctgctgatgaactccaccagtctggatatcaac
gtgtctgaaactctggctaacaagagcctcatcatcacaacaatactggagaacccgtat
gtgatgagaaaaatgaattaccaggagtttgagggaaatgagcagtatgagggtttttgt
gtggacatgttgagagagctgtctgatatcctcaagttcacctaccgcatcaaacttgtg
gacgatggcctgtacggggcacctgaacccaacggctcatggacaggcatggtgggagaa
ctgatcaacaggaaagctgatttggctgtagcagcttttaccatcacatctgagagagaa
aaggtcattgacttctcaaaaccctttatgaccctgggcatcagtattctctacagggtc
catataggcaggaagccaggttatttctccttcctggatcctttctcaccggctgtttgg
ctcttcatgctgctggcttacctcgctgtcagctgtgtgctttttctttctgctaggttg
agtccatatgaatggtataaccctcacccgtgtctgcgtgagcgcagagacctgctggaa
aatcagtacacgctaggaaacagtctgtggtttcctgtcgggggcttcatgcagcagggg
tcagagatcatgccccgagccctctccacacgctgcgtcagtggggtctggtgggcattc
actctcataataatctcttcatacacagcgaatctggctgcgtttctcacagtgcagaga
atggaagtgccaattgaatcacccgatgacctggctgatcaaaccaatatccagtacggc
accattcatggaggaagcaccatgaccttttttatgaactctcgttatcaaacgtaccag
cggatgtggaactacatgtattctaagcagcccagtgtctttgtgaagagcacagaagag
ggcattgcacgagtcttgaactccaaatatgcctttctgcttgagagcaccatgaacgag
taccaccgcagcctcaactgcaacctcacccaaattggaggcctgctggacaccaagggt
tacggaatcggcatgcctctcggttctcctttcagagatgagatcagtctggcagttctg
cagttgcaggagaataacaggttggagatcctgaagagaagatggtgggagggagggcag
tgtcccaaagaggaagaccaccgcgccaaaggtcttgggatggaaaacattggcggtata
tttgtggtgttaatctgtggcctgattattgctgtgtttgtggctgtgatggagtttgtg
tggtccacacgccgatcagctgaaacagacgaggtacggcctctctcctgcgaccgccaa
tatcacagtcacactacagtgtctgtctgtcaggagatgttgacagaattccgtaacgcc
gtttcctgcaagaaaagttctcgtcttcgtcgccgccgacccctgtccagctctctggcc
cttcgacaccccacccgcatcactttaggggccccgcgtcccctgcgccttgtccgagag
atgcgccttagcaacggaaagctctacagcggtaccggacccctgactggaagttcaggg
cctgtgggaggcccttctgacatgggccccggcccccagcgactcctagaggacccatta
ggtgccaacagcacccctacagtggccctgggaccacccgcagtgacagtgcctctgcca
cggggctgcactcacgtgcgcatttgccaggaatgccggcgtatccagagtctccgcaca
acctcttgcacacgtatccctccctcctcggcccctctgcctcgtctggccccgccccct
ccacactcatcctccaatacagacagcgaaggcggcggcgggccgagcccatgccggata
ggccactccccgccagcaaaaggctgcactttaccgccacctcagtctagcaacaacaca
gacctaatgggagagcagaaatga
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