Labeo rohita (rohu): 127178216
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Entry
127178216 CDS
T09007
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127178216 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127178216 (abcb4)
04147 Exosome [BR:
lroh04147
]
127178216 (abcb4)
04090 CD molecules [BR:
lroh04090
]
127178216 (abcb4)
Enzymes [BR:
lroh01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127178216 (abcb4)
Transporters [BR:
lroh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127178216 (abcb4)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127178216 (abcb4)
CD molecules [BR:
lroh04090
]
Proteins
127178216 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
RsgA_GTPase
Rad17
AAA_16
G-alpha
AAA_5
DUF87
AAA_28
AAA_30
AAA_15
AAA_29
PRK
DUF815
NTPase_1
Motif
Other DBs
NCBI-GeneID:
127178216
NCBI-ProteinID:
XP_050986897
LinkDB
All DBs
Position
16:16668024..16687250
Genome browser
AA seq
1269 aa
AA seq
DB search
MGKKSKVELSNGKAEENGDVSSEKNDKKEEKEKMEMVGPFELFRYADGLDILLMLLATVM
SMANGAVLPLMVIVFGDMTNSFAQDAFIENMKNLTNITFPQSNETLGEQMTKHAIYYSIM
GFVVLVAAYMQVAFWTLAAGRQVKKLRKKFFHSIMKQDIGWFDINETGQLNTRLTDDVYK
INEGIGDKLGMLIQSMTTFFTGIIIGFVKGWKLTLVILAVSPLLGISAAVIGKVMSSFTS
REQTAYAKAGAVAEEVLSSIRTVFAFGGQKKEIQRYHKNLEDAKNVGVRKAITVNIAMGF
TFFIIYMSYALAFWYGSTLILAGEYDVGILLTVFFAVIIGAFGLGQTSPNIQSFSSARGA
AHKVYHIIDHEPTINSFSTEGHKLDAVKGDIEFKNIHFTYPSRQDVKVLNGVNLKVMSGQ
TIALVGSSGCGKSTTVQLLQRFYDPQEGTVSIDGHDIRSLNVRSLRELIGVVSQEPVLFA
TTVAENIRYGRENVTQEEIEQAAREANAYNFIMKLPDKFETLVGERGTQMSGGQKQRIAI
ARALVRNPKILLLDEATSALDAESETIVQAALDKVRLGRTTIIVAHRLSTIRNADVIAGF
QNGEIAELGTHDELMEKKGIYHTLVTMQMVRSTEKTEEGKEEMFIDEKSPSVSSLNEHTL
FRQKSRSGSEKEQQDEEKQTEEEKVPNVSFLTVLKLNKPEWLYIVVGVLCATVNGAMQPA
FAIIFSKIIAVFAEVDQDLVRKRTELYSLLFAGIGVVSFFTLFFQGFCFGKAGEILTMRL
RFRAFNAMMRQDLSWYDDNKNSVGALTTRLAADTAQVQGATGVRLATMAQNVANLGTSII
ISFVYGWQLTLLILSIVPIMAVAGAIQMKLLGGHALKDKKELEQAGKIATEAIENIRTVV
SLTRESKFESLYEENLLVPYKNAKRKAHIFGLTFSFSQAMIYFAYAGCFKFGSWLIEQKL
MTFEGVFLVISAVVYGAMALGEANSFTPNYAKAKMAASHIMMLINRVPGIDNASEEGDKP
DKFEGNVNFENVRFNYPSRPDVPVLQGLRLRVKKGQTLALVGSSGCGKSTTIQLLERFYD
PQQGTVMLDDSDAKQLNIHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRQVSQQEIEEA
AKAANIHSFIEGLPQKYQTQAGDKGTQLSGGQKQRIAIARAILRNPKLLLLDEATSALDT
ESEKIVQDALDKAREGRTCIVVAHRLSTIQNADRIAVFQNGVVAEQGTHQQLLSQQGVYY
TLVTSQMSH
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaatccaaagtggaactgtcaaacggcaaagcagaggagaatggagatgta
agcagtgagaaaaatgacaagaaagaagagaaggaaaagatggagatggtgggaccattt
gagttgtttcgctatgcagatggtctcgacattcttctgatgctgcttgccacagtcatg
tccatggccaacggggcagtacttcctctcatggttattgtatttggagacatgacaaac
agctttgcgcaagatgcattcatagagaatatgaagaacctcaccaacatcaccttccca
cagtccaatgagactttaggagagcagatgacaaagcatgctatatactacagcataatg
ggatttgtagttttggtggcggcatatatgcaggtggccttttggactcttgctgcagga
cgtcaggtgaagaaacttagaaagaagttctttcactccatcatgaaacaggacattggc
tggtttgatatcaatgagacaggacagctcaacacacgccttacagatgatgtctacaaa
ataaatgaaggcattggggataagcttggcatgctgattcagagtatgaccacctttttc
actgggatcatcattggttttgtcaaaggctggaagctgacccttgtcattcttgctgtt
agccctttactggggatctcagctgctgtcattggaaaggtgatgtcatcattcacgtcg
agggaacagacggcctatgccaaggctggagcagtggctgaggaagtgctgtcatccatc
aggactgtctttgcctttggtggacagaagaaagagatacagaggtatcataaaaactta
gaggatgcgaagaacgttggcgtaaggaaggccatcactgtgaacattgctatgggcttc
acattcttcattatctatatgtcctatgcactggccttttggtatggcagcactcttatc
ctggctggcgagtatgatgtcggcatacttttaactgttttcttcgcagtcataattgga
gctttcggcctaggtcaaacgtctcctaacatccagtccttctctagtgcaagaggggct
gcccacaaagtttaccacatcattgatcatgaacccacgatcaacagtttctcgacagaa
ggacacaaacttgatgctgtaaaaggagacatagagttcaaaaacattcacttcacatac
ccctcacggcaggatgtgaaagttctgaatggtgtgaatcttaaagtcatgagtggacaa
accattgctttggtgggcagcagtgggtgtggaaaaagcacaacagttcagctgctacaa
cgcttctatgacccacaggaaggaacagtgtctatagatggccatgatattcgcagtctg
aacgtgcgaagtctaagagaactaattggcgtagtcagccaggagccagtgctgtttgcc
acaaccgttgcagaaaacatccgctacggccgcgaaaacgtcactcaggaggagatcgag
caggccgcacgtgaagccaacgcctacaacttcatcatgaagctcccagataaatttgag
actctggttggagagaggggcacccagatgagtggcggacaaaagcagcgtattgctatt
gcacgagcgcttgtgcgcaacccaaaaatcctccttttagatgaagctacatctgctctg
gatgccgagagtgagactattgtgcaagcagcgttagataaggtgaggctgggcaggacc
accattatagtggctcaccggctgtccactattcgaaatgctgatgtcattgctggattc
cagaatggtgaaattgcagaactgggcacacatgacgaactgatggagaaaaaaggaatc
taccacactcttgttacaatgcagatggttaggagcacagagaaaacagaagagggcaag
gaggagatgtttattgatgagaagagtccctcagtcagctctctgaatgaacacacactc
ttcagacagaaatccagaagtggctcagaaaaagaacagcaagatgaggagaaacagaca
gaggaggaaaaggttccaaacgtctccttcctgacagtcctgaaactgaacaaaccggaa
tggctgtacatagtggttggagttttatgtgccaccgtaaacggagctatgcagcctgca
tttgctatcattttctcgaaaatcattgctgtgtttgctgaggttgatcaggatctcgta
cgaaagaggacagagctgtactctctgctgtttgctggcattggggtcgtgtcctttttc
actttgttcttccagggtttctgttttggcaaagctggtgagattctgaccatgcgactg
aggtttagagcctttaatgctatgatgagacaggacctgagctggtatgatgataacaag
aacagtgtgggtgcactgaccaccagactggctgcagatacagctcaagtgcagggcgca
actggcgtgcgattggcaacaatggcacagaatgtagccaacttgggcacttcaattatc
atctcatttgtgtacggctggcagttgaccctcctcattctttccattgtgccgatcatg
gctgtggctggagccatccagatgaaattactggggggacatgctctaaaagacaagaaa
gagcttgagcaagctggaaagattgcaacagaagccattgagaatatccgtaccgtggtt
tcattaaccagggagagcaagtttgagagtctgtatgaagagaacttacttgtgccatac
aagaacgcgaagagaaaagctcacatttttggcctgacgttctccttctctcaagcgatg
atctattttgcttatgctggctgtttcaagtttggctcttggctcattgaacaaaaactg
atgacctttgagggtgtcttccttgtgatctcagctgtggtgtatggagcaatggctctt
ggagaggcaaactcattcactccgaactacgccaaggccaagatggctgcttctcatatc
atgatgctcatcaacagagtcccaggcattgataacgcctcagaggaaggagacaagccg
gataaatttgaagggaatgtgaattttgaaaatgtgcgttttaactacccgtcccggccg
gatgtaccagtactgcagggtctcaggctccgggtgaagaaggggcaaactcttgccctg
gtgggcagcagtggctgtggcaagagcaccaccatccaattactggagagattttatgac
cctcagcagggcacagtgatgctggatgacagtgacgcaaagcaactgaacattcactgg
ttgcgctcgcaaattggcatcgtttcccaagagcctgtgctgtttgactgcagcctggca
gagaacatcgcatacggagacaacagtagacaagtcagccagcaggagatcgaggaggcc
gctaaggctgctaacatacactcttttatagaaggcctgcctcagaaataccagacgcaa
gcaggtgataaaggtacgcagctgtctggagggcagaagcagcgtattgctatagcgagg
gccatcctccgcaaccccaaacttttgttgctggatgaagccacatctgctctggacact
gagagtgagaagatagtgcaggatgctttggataaggcgcgtgagggccgcacatgcatc
gttgtggcccaccggctgtccaccatccagaacgcagaccgtatagctgtattccaaaac
ggagtggtggcggaacaaggcacacatcaacaactcctcagtcagcaaggggtgtactac
actcttgtcacctctcagatgagtcactga
DBGET
integrated database retrieval system
