KEGG   Labeo rohita (rohu): 127178218
Entry
127178218         CDS       T09007                                 
Symbol
itga8
Name
(RefSeq) integrin alpha-8
  KO
K06584  integrin alpha 8
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04510  Focal adhesion
lroh04512  ECM-receptor interaction
lroh04514  Cell adhesion molecules
lroh04810  Regulation of actin cytoskeleton
lroh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127178218 (itga8)
   04514 Cell adhesion molecules
    127178218 (itga8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127178218 (itga8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127178218 (itga8)
   04810 Regulation of actin cytoskeleton
    127178218 (itga8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lroh04515]
    127178218 (itga8)
Cell adhesion molecules [BR:lroh04515]
 Integrins
  Integrin alpha subunits
   127178218 (itga8)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 127178218
NCBI-ProteinID: XP_050986901
LinkDB
Position
16:complement(16784291..16866780)
AA seq 1048 aa
MHPCLFRVCFRGVLLIFSILCKAAAFNLDLEKPTVYNGPEGSYFGYSLDFYHPTQDRNVM
SVLVGAPKANTSQPGIVEGGAVYYCPWPASDPDSCRQIPFDKANNRMIKVNGTREPLEFK
SHQWFGATVRTHKGKVVACAPLYHWRTVKVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNN
PDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGYSLKTILRKVQG
EKQTVAASDTYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVAVINATNLTFIQN
FTGEQMASYFGYTIAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRVYLYLQEDVLLF
SPPITLTGTHLFGRYGSAIAPLGDINQDGYLDVAIGAPFAGEDRGGRVFIYNGQKSGLML
QASQVLKGDWASSAVPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVAYRARPVVTVDA
QLILTPRILNPEDKSCRMPNSDDMVTCLSVNVCAKISGIGIPDYVALRMDLQLDWLKQRG
AVKRILFMDSHQHQRTQQLVLGQGDRQHCHNYSVYLRDEGEFRDKLSPISVTLNYSLDQN
SPPPGLQLRPILDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDQTELIIGDDNLLM
LIINAANEGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTENDTRVVVCDLGNP
MVADTNLSVGLRFSVQRLEDAPPTIGFELQIHSSNKDNSRSSPVNLTLSIAARAQVEIRG
VSHPAQVVLPFPRWEPKEKPVREDDVGPQVQHIYELHNKGPSSISRTLLEVGWPSRYREE
HLLYALQIITDGPVHCSVNGSINPLKLETSTLQDTPELLGFLRNSSGPTRHRRSVSTAQS
YNSKILNCSNINCLMVECVVDRLDRGQSAVIKFRSRLWAHTFLQRRNDHYTLNSTVSFQV
LAMPYRIKADSLPHQSKSIGTFVVWAIPDVSFAIPLWVIILAILLGLLVLAMLSLAMWKC
GFFDRARPPKDDDVSDREQLTAEKSTDA
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgcacccttgtttattccgcgtgtgttttcgtggggttttgctcatattttcaatttta
tgcaaagctgctgctttcaacctggatttggaaaagccaacggtttacaatggaccagag
ggaagttattttggatactcactggacttctaccacccaacgcaggacagaaacgtcatg
tcggtgctggttggggctcctaaagcgaacacctctcagccaggaattgtggagggagga
gcggtgtactactgcccctggccggcatcagacccagactcctgccgccagatccccttt
gataaagcaaataaccggatgattaaagtgaacgggacgcgggagcctctagaatttaaa
tcccatcagtggtttggggccacagttaggacccacaaaggcaaagtggtggcttgtgcg
cccctttatcactggaggacagtgaaggtcagcagtgagatggatccagtgggaacttgt
tatgtggctgtgcagaactttagtgcctatgctgagtattcaccatgtcgaaccaataac
ccggaccccgagggccagggcttttgccaggcaggcttcagcgttgatttcactaaggaa
gggactctggttgtgggagggccagggagtttctactggcaaggtcaagtgatcactgca
ggagttgcagaaatactgaacggctattccctgaaaaccatcctgcgcaaagttcaggga
gagaagcagactgtggctgcatcggacacatatgatgacagttacctaggttactctgta
gcagttggagagttcacaggtgattcagaacaagaactggtagcaggggtacctcgaggg
gcgcacaactttggctatgtggctgtgatcaatgcaacaaacctgacatttattcaaaat
tttactggggagcagatggcctcttattttggatacaccattgcagtgactgatctaaat
ggagatgggctagatgacgtgctagttggagctccactctacatggatcgtgaatttgaa
agtaaaccccgtgaagtgggccgtgtgtacttgtacctgcaagaggacgtgcttctcttc
tcccctcccatcacacttactggaacgcacctgttcggccggtacggaagtgccatcgcc
cctcttggagatatcaaccaggatggctaccttgacgtggctataggagctccgttcgca
ggggaggatcgtggtggcagagtcttcatctacaacgggcaaaaatctgggctgatgtta
caggcctctcaagtgctgaaaggcgactgggcctcatccgccgtcccagcaggctttgga
ttcactctgcgtggagattctgacctggataacaaccagtaccctgatttgctggtcggt
gcatttggagtgagtaaagttgtggcctacagggcaaggccagtggtcactgtggatgct
cagctcattttgacacccagaattctcaatccagaggacaagtcctgtcgcatgcccaat
tctgatgatatggtaacctgtctgtcagtaaatgtctgtgcaaagatctctgggattggt
attcctgattatgtagctctgagaatggacctgcagctggattggctgaagcagcgtgga
gcagttaagaggatcttgttcatggactctcaccagcaccagagaacccaacagttggtt
ctgggtcaaggggaccgccagcattgccacaactactctgtttacctgcgggatgaggga
gaattcagagataaactgagtcctatcagtgtgacactaaactacagtctggaccagaac
tcccctccacctggcctccagctgcggcccattttggaccactacagcaagacctttcac
catgagcaggcaaacatcctgttggactgtggagaagacaacatgtgcatcccagatctc
aaactttctgctaaaatggaccagactgaacttataattggggatgacaacttgcttatg
ttgatcattaatgcagccaatgagggcgagggggcgtatgaggcagagcttcatgtgact
ctcccaccagaggcagactatattggtgtggagcgcagacgtgaggatctccagcggctg
aactgtgagcacaggacggagaatgataccagagttgtggtttgtgacctgggaaaccca
atggtggctgacacaaatttgtcggttggtttacggttttctgtacagaggttggaagat
gcccctcctaccattggctttgagctgcagatacacagctcaaacaaggataactcaaga
agctctccagtgaatctgactctaagcattgcagcgagagcacaggtggagatcagaggt
gtgtctcacccagctcaggttgttttgcctttccctcgatgggaacctaaagagaaacct
gtgcgagaggatgacgttggccctcaggttcaacatatatatgagttacataataagggt
ccaagttcaataagcaggactctgttggaggtgggctggcccagtcggtaccgtgaggaa
cacctcctttatgcccttcagatcattactgatggacctgttcactgcagtgtcaacggc
tccataaacccgctgaagttagagacttccactcttcaggacactccagaattactaggc
tttctgaggaacagcagcggcccgactcgccacagacgatctgtttctacagcccagagt
tacaacagcaagatactgaactgctcaaatatcaactgcctgatggtggagtgtgttgtg
gatcgcctggatcgagggcaaagcgcagtgatcaagttcagatctcgactctgggctcac
accttcttacagagacggaatgaccactacacgctcaactccacagtgtcctttcaagtg
ttggccatgccttatcggatcaaagccgattcactcccacaccagagcaaatcaattggc
acgtttgtggtgtgggccattcctgacgtttcttttgccattcccctgtgggtaataatt
ctggctatactgctgggattgctggtgctggctatgcttagcctagcaatgtggaagtgc
ggcttcttcgatcgggcgcggccacccaaagacgatgacgtgtccgaccgtgagcagctg
accgcagaaaaatccacagacgcgtga

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