Labeo rohita (rohu): 127178218
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Entry
127178218 CDS
T09007
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04514
Cell adhesion molecules
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127178218 (itga8)
04514 Cell adhesion molecules
127178218 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127178218 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127178218 (itga8)
04810 Regulation of actin cytoskeleton
127178218 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127178218 (itga8)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127178218 (itga8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
127178218
NCBI-ProteinID:
XP_050986901
LinkDB
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Position
16:complement(16784291..16866780)
Genome browser
AA seq
1048 aa
AA seq
DB search
MHPCLFRVCFRGVLLIFSILCKAAAFNLDLEKPTVYNGPEGSYFGYSLDFYHPTQDRNVM
SVLVGAPKANTSQPGIVEGGAVYYCPWPASDPDSCRQIPFDKANNRMIKVNGTREPLEFK
SHQWFGATVRTHKGKVVACAPLYHWRTVKVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNN
PDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGYSLKTILRKVQG
EKQTVAASDTYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVAVINATNLTFIQN
FTGEQMASYFGYTIAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRVYLYLQEDVLLF
SPPITLTGTHLFGRYGSAIAPLGDINQDGYLDVAIGAPFAGEDRGGRVFIYNGQKSGLML
QASQVLKGDWASSAVPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVAYRARPVVTVDA
QLILTPRILNPEDKSCRMPNSDDMVTCLSVNVCAKISGIGIPDYVALRMDLQLDWLKQRG
AVKRILFMDSHQHQRTQQLVLGQGDRQHCHNYSVYLRDEGEFRDKLSPISVTLNYSLDQN
SPPPGLQLRPILDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDQTELIIGDDNLLM
LIINAANEGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTENDTRVVVCDLGNP
MVADTNLSVGLRFSVQRLEDAPPTIGFELQIHSSNKDNSRSSPVNLTLSIAARAQVEIRG
VSHPAQVVLPFPRWEPKEKPVREDDVGPQVQHIYELHNKGPSSISRTLLEVGWPSRYREE
HLLYALQIITDGPVHCSVNGSINPLKLETSTLQDTPELLGFLRNSSGPTRHRRSVSTAQS
YNSKILNCSNINCLMVECVVDRLDRGQSAVIKFRSRLWAHTFLQRRNDHYTLNSTVSFQV
LAMPYRIKADSLPHQSKSIGTFVVWAIPDVSFAIPLWVIILAILLGLLVLAMLSLAMWKC
GFFDRARPPKDDDVSDREQLTAEKSTDA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcacccttgtttattccgcgtgtgttttcgtggggttttgctcatattttcaatttta
tgcaaagctgctgctttcaacctggatttggaaaagccaacggtttacaatggaccagag
ggaagttattttggatactcactggacttctaccacccaacgcaggacagaaacgtcatg
tcggtgctggttggggctcctaaagcgaacacctctcagccaggaattgtggagggagga
gcggtgtactactgcccctggccggcatcagacccagactcctgccgccagatccccttt
gataaagcaaataaccggatgattaaagtgaacgggacgcgggagcctctagaatttaaa
tcccatcagtggtttggggccacagttaggacccacaaaggcaaagtggtggcttgtgcg
cccctttatcactggaggacagtgaaggtcagcagtgagatggatccagtgggaacttgt
tatgtggctgtgcagaactttagtgcctatgctgagtattcaccatgtcgaaccaataac
ccggaccccgagggccagggcttttgccaggcaggcttcagcgttgatttcactaaggaa
gggactctggttgtgggagggccagggagtttctactggcaaggtcaagtgatcactgca
ggagttgcagaaatactgaacggctattccctgaaaaccatcctgcgcaaagttcaggga
gagaagcagactgtggctgcatcggacacatatgatgacagttacctaggttactctgta
gcagttggagagttcacaggtgattcagaacaagaactggtagcaggggtacctcgaggg
gcgcacaactttggctatgtggctgtgatcaatgcaacaaacctgacatttattcaaaat
tttactggggagcagatggcctcttattttggatacaccattgcagtgactgatctaaat
ggagatgggctagatgacgtgctagttggagctccactctacatggatcgtgaatttgaa
agtaaaccccgtgaagtgggccgtgtgtacttgtacctgcaagaggacgtgcttctcttc
tcccctcccatcacacttactggaacgcacctgttcggccggtacggaagtgccatcgcc
cctcttggagatatcaaccaggatggctaccttgacgtggctataggagctccgttcgca
ggggaggatcgtggtggcagagtcttcatctacaacgggcaaaaatctgggctgatgtta
caggcctctcaagtgctgaaaggcgactgggcctcatccgccgtcccagcaggctttgga
ttcactctgcgtggagattctgacctggataacaaccagtaccctgatttgctggtcggt
gcatttggagtgagtaaagttgtggcctacagggcaaggccagtggtcactgtggatgct
cagctcattttgacacccagaattctcaatccagaggacaagtcctgtcgcatgcccaat
tctgatgatatggtaacctgtctgtcagtaaatgtctgtgcaaagatctctgggattggt
attcctgattatgtagctctgagaatggacctgcagctggattggctgaagcagcgtgga
gcagttaagaggatcttgttcatggactctcaccagcaccagagaacccaacagttggtt
ctgggtcaaggggaccgccagcattgccacaactactctgtttacctgcgggatgaggga
gaattcagagataaactgagtcctatcagtgtgacactaaactacagtctggaccagaac
tcccctccacctggcctccagctgcggcccattttggaccactacagcaagacctttcac
catgagcaggcaaacatcctgttggactgtggagaagacaacatgtgcatcccagatctc
aaactttctgctaaaatggaccagactgaacttataattggggatgacaacttgcttatg
ttgatcattaatgcagccaatgagggcgagggggcgtatgaggcagagcttcatgtgact
ctcccaccagaggcagactatattggtgtggagcgcagacgtgaggatctccagcggctg
aactgtgagcacaggacggagaatgataccagagttgtggtttgtgacctgggaaaccca
atggtggctgacacaaatttgtcggttggtttacggttttctgtacagaggttggaagat
gcccctcctaccattggctttgagctgcagatacacagctcaaacaaggataactcaaga
agctctccagtgaatctgactctaagcattgcagcgagagcacaggtggagatcagaggt
gtgtctcacccagctcaggttgttttgcctttccctcgatgggaacctaaagagaaacct
gtgcgagaggatgacgttggccctcaggttcaacatatatatgagttacataataagggt
ccaagttcaataagcaggactctgttggaggtgggctggcccagtcggtaccgtgaggaa
cacctcctttatgcccttcagatcattactgatggacctgttcactgcagtgtcaacggc
tccataaacccgctgaagttagagacttccactcttcaggacactccagaattactaggc
tttctgaggaacagcagcggcccgactcgccacagacgatctgtttctacagcccagagt
tacaacagcaagatactgaactgctcaaatatcaactgcctgatggtggagtgtgttgtg
gatcgcctggatcgagggcaaagcgcagtgatcaagttcagatctcgactctgggctcac
accttcttacagagacggaatgaccactacacgctcaactccacagtgtcctttcaagtg
ttggccatgccttatcggatcaaagccgattcactcccacaccagagcaaatcaattggc
acgtttgtggtgtgggccattcctgacgtttcttttgccattcccctgtgggtaataatt
ctggctatactgctgggattgctggtgctggctatgcttagcctagcaatgtggaagtgc
ggcttcttcgatcgggcgcggccacccaaagacgatgacgtgtccgaccgtgagcagctg
accgcagaaaaatccacagacgcgtga
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integrated database retrieval system