Labeo rohita (rohu): 127178233
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Entry
127178233 CDS
T09007
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127178233 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127178233 (rad54b)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127178233 (rad54b)
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Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
127178233
NCBI-ProteinID:
XP_050986921
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All DBs
Position
16:complement(17894817..17917096)
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AA seq
917 aa
AA seq
DB search
MRRSGAPSQLRGNAAKIPRFMPPGPARNDGPPLSGPQPEPSVPSPPAPNALGNVLLNKVQ
KCLSSADAPSVTSAPVGSKALARVLSAVPQGEFNENSFRSSPDFPEPEQPADKDSCSTQP
NTHPNNTATARYYSVMWCKASSRKHKRWEGDAVLVARGRTVVLKDMEGRDIGRGSGYKVS
ELESLSEGQTLMVGGKQIEVMGVISDEDYAKGRCFQDAAVETPAETVLKAPVYRPVSKSF
TRPALKGGALTDSEPDKPICKPRHDPNAPGALVMPRPTTDHQWLYNKSGSPLVDVVIDPH
LTNHLRPHQKEGVVFLYECLMGMRLSGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGG
RPVLKRALVVCPGSLVKNWAAEFNKWLGRERISVYTVDQDHRVEDFVSSPLCSVMVISYE
MLLRSVDQLKELDFGVLICDEGHRLKNSNIKTAGAITALSCERRLILTGTPVQNDLQEFY
SIVEFVNPGILGTSAAYRKIYEEPILRSRQPTCTEEERCIGEERAAELFRLTGVFTLRRT
QEIINQYLSERIEWTVFCKPTELQLRLYGVLLATRPIRACLSGASTHTYTHSPHLACINA
LKKLCNHPGLLYNTLQEKSDEMYEDGIMELFPEGYATGAFGSADSGKLLVLTDLLSAIQH
VNRTDRVVLVSNYTQTLDLLQDVCDHIGYKWCRLDGQTPVAQRQRIVDSFNSPHSSHFLL
LLSSKAGGVGLNLIGASHLILYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGSIEE
KIYQRQVSKQGLSGTVVDLSKKADHISFSAEELRDLFSFDPNTTCLTHDLLDCQCSGDGN
TPGFEKEIKEETGRACQLGRHADSTVSFPQRVSMSELMHWRHFSGDVQSYDDIYLNHARN
HITYAFQSTTSKSQTTA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagatctggagctccgagtcagctccgtggaaatgctgctaaaatacccaggttt
atgccaccagggcctgcgaggaatgatggaccacctttatctggtccccaaccagaacca
tcagtcccgtcaccaccagcacccaatgctttgggaaatgtgctgcttaataaggttcag
aagtgtttgagtagtgcagatgctccatctgtgactagtgctccagtgggcagtaaggct
ttagccagggtcctgagtgcagttcctcaaggtgaatttaacgaaaacagcttcaggtct
tcacctgactttcctgagcctgaacaaccagcagataaagacagctgctcaactcagcca
aacacgcatcccaacaacacagctaccgcacgctactatagcgtaatgtggtgtaaggca
tcatcaaggaagcataagcgctgggaaggcgacgctgtgctggttgccagggggcggact
gttgtcctcaaagacatggagggacgggacattggacgaggttcaggctacaaggtatcg
gagctggagagcttgagtgagggtcagactcttatggtaggagggaagcaaatcgaggtc
atgggggttatatccgatgaggactacgccaaaggtcgttgctttcaagatgctgctgtt
gagactcctgcagaaacagtcttgaaagctcctgtatatcgaccggtgtctaaatccttt
accagaccagcgctcaagggaggtgcacttacagattctgaacctgacaaaccaatctgt
aagcccagacatgacccaaatgcaccaggtgcccttgtgatgccgcgaccgacaactgat
caccaatggctgtataataaatccggttctccactggtggatgtggtcattgacccccat
ttgaccaatcatcttcggccacatcagaaagagggcgtggtcttcctttacgaatgttta
atgggaatgagactgtctggccgctgtggggctattctggcagatgagatgggccttggg
aagactctgcagtgtgtttgtgttctgtggacgctactgagacagggcccctatggtgga
cggcctgtactgaagagagcacttgtggtttgtccaggaagtttggtcaagaactgggct
gctgagttcaacaagtggctgggcagggagaggatcagtgtttacactgtggaccaggat
catcgcgtggaggattttgtgtcttctcctctttgctctgttatggtgatcagttacgag
atgctgctgcgctctgtggaccagcttaaagagctggattttggagtgctcatctgtgac
gagggtcatcgccttaaaaacagcaacatcaaaacggccggtgcaatcacagccctctca
tgcgaacgccgtcttatattaacaggtactccagtgcagaatgacctgcaggaattttat
tccatcgttgagtttgtaaatccaggaattctgggaacatcagcagcctacaggaagatt
tatgaagagcccattctcagatctcgccagcccacctgcactgaggaggagcggtgcatt
ggagaggagcgtgccgctgagctctttcgtctaacaggtgtgtttacgttacggcgcact
caggagatcattaatcagtatttatccgagcggatagagtggaccgtattctgcaaacct
actgaactgcagctgcgtctgtatggagtcctgctggccacgcggcctatcagagcctgc
ctctctggtgccagcacacacacttacacacacagcccacaccttgcatgcatcaacgcc
ctcaagaagctctgcaaccaccctgggctgctctacaacactttacaggaaaagtcagat
gagatgtatgaggatggaattatggaactctttcctgagggatacgctacaggtgctttt
ggcagtgcagactctgggaaacttctagtgcttacagacctgctgtcagcaatacagcac
gtcaatcgcacagacagggttgttttggtgtcaaactacacacaaactcttgacttactg
caggatgtctgtgatcacataggctataaatggtgtcggcttgatggacagacacctgta
gcccagagacaacgcattgttgattccttcaacagcccacattcatcccacttcctgttg
ctacttagttcgaaggctggaggggtgggactaaacctcattggtgcctcacatcttatt
ttatatgatatagactggaaccctgccaatgacatacaggccatggcacgtgtgtggaga
gatggacagaagaaaacagttcacatctacagatttcttacaacaggttccatagaagaa
aagatttatcagaggcaggttagtaaacaagggctttctgggacagtggtggacctgtcc
aagaaagctgatcatattagcttttctgctgaggagctgcgggaccttttcagctttgac
cctaataccacctgcctcacgcacgacctactcgactgccagtgctctggagatggaaat
acaccaggctttgagaaggagataaaggaggagaccggaagggcgtgtcagctgggtcgc
catgcggacagcacggtatcatttccacaacgagtcagcatgtccgagctcatgcactgg
aggcatttctctggggatgttcaatcatatgatgatatttacctaaaccatgcccgtaac
cacatcacatacgcctttcaaagcaccacttctaaatcccaaaccacagcctaa
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