Labeo rohita (rohu): 127178276
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Entry
127178276 CDS
T09007
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04814
Motor proteins
lroh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127178276 (dync1i1)
09142 Cell motility
04814 Motor proteins
127178276 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127178276 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127178276 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127178276 (dync1i1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
127178276 (dync1i1)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127178276 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Dynein_IC2
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IP5PC_F
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
127178276
NCBI-ProteinID:
XP_050986984
LinkDB
All DBs
Position
16:complement(18779598..18795610)
Genome browser
AA seq
645 aa
AA seq
DB search
MADRSDLKAELERKKQRLAQIREEKKRKEEERKKKESEMLQRAENVSEDSDLDRKRRETE
ALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSPPSETGSQESIDGGTV
GRTLQWDTDPSALQLLADSVHGCRMQRLGASKIVQIDFMPKELVTYCKETQTPVASDQPE
EEEDEELSVTKSEPVPQQLEEESSQETEEVYPRELTNEEKEQIVHSEDFLFFFDRSIRVM
ERVLAEDTDIFFDYSGRDMEDKEGDMQAGSNLCFNRHFYDEHWSKHRVVTSLDWSPQYPE
LLVASYNTNEDAPHEPDGVVLVWNMKFKKMTPEYIFHCQSSVMSVGFAQFHPNLVIGGTY
SGQIALWDNRSHRRTPVQRTPLSATAHTHPVYCVNVVGTQNANNLITVSTDGKMCSWSLD
MLSQPQESMELIYNKSKPVAVTCMAFPASDVNNYVVGSEEGTVYTASRHGSKAGIGEMFD
GHQGPVTGISCHNAVGPVDFSHLFTTSSFDWTVKLWSTKHNKPLYSFEDNADYVYDIMWS
PVHPALFATVDGNGRLDLWNLNNYTEVPSASVTVEGGCALNRVRWASGGREVAVGDSEGQ
VWIYDVGEQFAVPHTDDWSKFARTLMEIRANRGDGEEEGALELPA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagaagtgacctgaaagctgagcttgagcgcaaaaagcagcgcttagcccag
attcgagaggagaagaaaagaaaggaggaagagagaaagaagaaagagtctgagatgctt
cagagggctgaaaatgtgtccgaagactcggacctggacagaaagagaagagagacagag
gctcttctacagagcattgggatttcaccagaaccaccattagtgcagccactgcagctt
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctcttcg
caatcagtgagcccacccagtgaaacgggaagtcaggagtccatagatggagggacagtg
ggaaggacgttacagtgggacaccgacccctcagctcttcagcttctcgcagattctgtt
catgggtgcaggatgcaaaggcttggtgcatcaaaaattgttcagattgatttcatgcca
aaagaactggtgacatactgtaaagagacacagactcctgttgcatctgatcagcctgaa
gaggaggaggatgaggaactgtcagtgaccaaatctgagccggtgccacagcagctggag
gaggagagctctcaggagaccgaagaagtttatcctagagaactgaccaacgaggaaaaa
gagcagattgttcattcagaggatttcctgtttttcttcgaccgaagtatccgtgtaatg
gagcgagtgttggccgaggatacggacattttctttgactacagtgggcgagatatggaa
gacaaagaaggggacatgcaagccggatcaaacttgtgttttaatcgtcatttctacgat
gagcattggtccaaacatcgagttgtcacttccctggattggtcgccacagtatcctgaa
ttgctagtggcctcgtacaacactaatgaggatgcgcctcatgagccagatggagttgtg
ctggtctggaacatgaagtttaagaagatgacccctgagtacattttccactgtcagtcc
tcagtgatgtcagttggctttgctcagtttcatcccaaccttgtgatcggagggacttac
tcaggacagatagcactgtgggacaatcgaagtcacaggaggaccccagtgcaacgaacg
cccttgtctgcaactgcacacactcatcccgtgtactgtgtgaatgtagtcggaacacaa
aatgccaacaacttgattacagtatccacagatggcaagatgtgctcctggagtctggat
atgctctcgcagcctcaggagagtatggagctgatctacaacaagtcaaaaccagtggcc
gtcacttgtatggccttccccgcaagtgatgtgaataactatgtggtaggaagtgaggag
ggcacggtttacacagcatcccgccatggaagtaaggctggtattggtgaaatgtttgat
gggcatcagggtcctgtgactggaatcagctgccataacgctgtgggtccggttgacttc
tcccacctctttaccacttcctcatttgactggacggtcaaactgtggtcaaccaaacat
aacaagccgctgtattcctttgaagacaatgcagactatgtatatgatattatgtggtct
ccagtgcatccagcactttttgctacagtggatggcaatggtcgtttggacctctggaat
cttaacaactacaccgaggtgccatccgcaagtgtgacagtagagggaggatgtgccctg
aaccgggtcagatgggcgtcagggggcagagaggtggccgtgggtgattcagagggccaa
gtttggatctacgacgtgggagagcagtttgctgtgccacatacagacgactggagcaaa
tttgcccgcacgctcatggagattcgcgcaaaccgaggggatggagaggaagaaggtgct
ttggagctgcctgcctga
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