Labeo rohita (rohu): 127178328
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Entry
127178328 CDS
T09007
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127178328 (tcea3)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127178328 (tcea3)
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Ortholog
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
127178328
NCBI-ProteinID:
XP_050987081
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All DBs
Position
16:complement(12932336..12946291)
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AA seq
716 aa
AA seq
DB search
MTREEDLLRIAKKLDKMVSRNNMDGALDVLRELKDFNMTLKLLQDTRIGMSVNGIRKHCT
DEDVVNLAKILIKNWKKLLESAQNQKSERSNEVKNGNHASKPPGSPNRTSPERQPSPRRS
TTEIKPDLDSNKKLDEKHRREKRDAELRNEKRESEQKKEKQPINNKKERERKDALNSGHI
PSPMTHSSPPPKCPPAGEVKRERHSLHFRSLGKDAPVDFFPPASINSHPPLRRSSIDVKR
ERKDTQGSLQSPSLQSHPPHKRPFIDGKKERRDAPHPLFPLHHHLHPPLPLHPPPIPIPK
RSSEVKKERKDPPETLPPPAPILSSPPPPLPPPPKRPSLEEPKERAKKAPDPNAPLPPLP
FHLHPPQKREMKKERKETAEPSTPLPPVPLHLQPPTPTKRPSLDTKKDKEKERKDPADPK
RRTSEHNEKDRKDTRDSKPLKRPSMKIKIERKDSTDSKKLHSRKLSLDGRRDSRDSTDSK
SSHHVLKRQSSEPKMERRDSTNSRSGSSPQAKKSSESKSKPETPKTPTTPTSPLSPSFSS
SVGPLSPRLQTGDSIRDKCIEMLAAALRTDDDYKDYGTNCEGMAAEIEDYIYQEIKATDM
KYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIAIMSAEEMASDELKQLRNVLTQEAI
REHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaggaggacctgttgcggattgctaaaaaactagacaagatggtgtctaga
aataacatggacggagctctagatgttctgagagaattgaaagatttcaacatgacactg
aagcttcttcaggatacaagaattggcatgtctgtcaatggaataagaaaacattgcaca
gacgaggatgttgtcaacttggcaaagattcttatcaaaaactggaagaagcttttggaa
tcagctcaaaaccaaaagtctgagaggtcgaatgaggtgaagaatggcaatcatgcaagc
aagccaccagggtcaccaaacagaacctctcctgagagacagcccagtccacgaaggtca
acaacggaaattaaaccagacttagactctaacaagaaactcgatgaaaaacacagaaga
gagaagcgcgatgcagagctcaggaacgaaaaacgagaaagtgagcagaaaaaagaaaaa
cagcctattaacaataaaaaggagcgagagaggaaagatgcattgaacagtggtcatatt
ccttctccaatgacgcattcatctccgccccccaagtgtcctccggctggggaagtgaag
agggagagacattcactgcacttcagaagtttggggaaagatgctcctgttgattttttc
cctcctgcttcgatcaattctcaccctcctctaagacgctcatcaatagatgtaaagaga
gagagaaaagacactcagggttctttacagtccccttctcttcagtctcatcctcctcat
aaacgtcccttcatagatggaaagaaagaaaggagagatgcacctcatcctcttttccct
cttcatcatcaccttcatcctccacttccacttcatcctcctcctattcctatccctaag
cgttcatcagaggtgaagaaagaaaggaaagatcctcctgaaactttacctcctcctgct
cctatactttcttctcctcctcctcctcttcctcctcctcccaaacgtccatcactagaa
gagcccaaagaaagggcaaaaaaagcacctgatccgaatgccccgcttcctcctttacct
tttcatctacatcctcctcagaaacgcgagatgaaaaaagagagaaaagaaacagctgaa
cccagcactcctcttcctcctgttccccttcatcttcagcctcctacacctacaaagcgt
ccctcattagacacaaagaaagacaaagagaaagaaagaaaagacccagcagacccgaag
cgacggacttctgaacacaatgagaaagatagaaaagacacaagagacagtaaaccactc
aaaaggccatcaatgaagatcaagattgagagaaaagactccacagattccaaaaagctc
cattctagaaaactcagcctggatggacggagagacagtagggactctactgactccaag
tcaagccatcatgttttgaaacgacaatcaagtgagccgaaaatggagaggagagattct
accaactcaaggtctggcagctcacctcaggccaagaaatcgagtgaaagcaagagtaaa
ccagagaccccaaagacacccacaacacccacaagccccctctccccatcgtttagctcc
agtgtgggtcctttatctcctcgcctgcaaaccggggattccatcagggacaaatgcatc
gaaatgctggccgctgcactacgtacagatgatgactacaaagactatgggacaaactgc
gagggcatggcggcagaaatcgaggattatatctaccaggagataaaagccacagacatg
aaatacaagaacagagtccgcagtcgcataagtaacctcaaagatcccaaaaatcccaat
ctgcgtaaaaatgtcttagctggagccatcgagttgagccgcatcgccatcatgtctgct
gaggagatggctagtgatgagctgaaacagttgaggaacgtgttgacccaggaggccatc
cgagaacatcagatggcaaagactggaggaaccaccactgacctgctgcagtgtggcaag
tgcaagaagaaaaactgcacctacaaccaggtgcaaacccgcagtgctgatgaaccaatg
accacctttgtgttgtgcaatgaatgcggtaatcgctggaagttctgctaa
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