Labeo rohita (rohu): 127178371
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Entry
127178371 CDS
T09007
Symbol
myom3
Name
(RefSeq) myomesin-3
KO
K24495
myomesin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127178371 (myom3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127178371 (myom3)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127178371 (myom3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
ig
Ig_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
Tissue_fac
C2-set_2
fn3_2
CytoC_RC
Motif
Other DBs
NCBI-GeneID:
127178371
NCBI-ProteinID:
XP_050987173
LinkDB
All DBs
Position
16:complement(2144832..2231819)
Genome browser
AA seq
1425 aa
AA seq
DB search
MATKIVTERCQEEQMEQMSHGMQMSSQIKKRKFKSSDEMASLSEFYPIIPGDVMSVKEIL
PGPKFPRHRTWEVLRETLSNDELHERDQWTMFGNEVEKLEIGVIRNQRVVRERVDRFALR
REAERKASLHMKYIEDLSMKAPDFPIPLRPHTVWAGMDVKLSCSVEGCPTPSITWYKDDV
PLRGALPWNYKLSQKFGLNVLEIRRCSAEDAGEFKVIVKSSLGEATSSARLIVNSHEGAE
AKLKRSWTPIPVPEPDAQLASTFPPTFVIEGDNLVLQCSFTSALLPFQQDVTWYRDGLVL
RQSSRVEMQTGLRSASLTLKRVHKEHEGLYSVRLRTWDGSVEHSAYVYVKDGPAVVVGAP
GSPLKLKCSDVNRDYVFLSWIPPSADGAAAVQGYFIERCEIGVGKWERCNDVVQRECHYP
IMGLKENTMYQFRVCAVNQAGVGRPSRPTNPVLTSDPLEPSRTTVVKVERGREIVITKDQ
LEGQIRVPFSPTDVRVCELSDTYAVLSWTEPDPRGREPLTYFVERSLTGKESWHLASMDM
TVLSTKFVVFDQQKGKSYIYRVRSVNKYGISEPSLPSEPVSLGQPLGVPAPPHGILSIRD
TNSSVLLQWKEPKVTEGIVGYYLYCSEVGSGQWKTINNKPITKTRFTVDGLKTNKEYVFR
VKSVGVAGNSVYSEECPAIRVKSAIYVPSRPSAIALLHCTGREMMIGWRAPANHGGDPVR
GYYLDQREKSQSTWREINIKPAKERVYEVTGLQEGHFYQFRVFAANIVGLGDASEPSELF
LCERWTMPEPGCPYDLEFREVRRNSLVLLWAEPIYKGQSDISGYIVEISEGAESEDWTPV
TSEPVTETHLKVSGLQAGQTYRLRVSAINAAGVGMSSMASEPVEAQTKAGTKEIEIGVDN
DGFIFLSFEIPEGTDKDVFKWSKNYGKAIDAGRARLENKNNRSVLTFTDASEQDLGLYTV
EQSSNPDVSSSFTFTAEDLERLTELSWHVRNPLIALKSEGWQIDVSEQGNVRLWLQTEPL
SSAAVLRLILNDREISSTPTRKINFDKANGLVEILFDQISRDEEGSYTAQLKDGRAKNQF
TLVFVDKKFQETLAKSQANRRNWKRKSGPHFKEFLSWTVTSDCEMIMKCKVTNVSKDTRV
KWFKDGMELPQAVYEPTGVCTLIIPQVTRKELGVYKVVVSDNRGEDETVLEMIDDEFERL
MQQLSKQCALSAGPVYIQCTAQGFKLYCSLKYYLTYMKTSWYFKEKRIDLEERTKPGSSM
QKVWIEIFNPTENDKGKYTLEMFDGQETHRRFLDLSGQAFADALLEYQRLKQVEFAEKNR
ARVTKGLPDVVAIMETKSLCLTCFADGDPVPEMFWLKNDREIISAGQYNIKNENKSSTLT
INHVTMEDSGNYSIFVRNKHGSQTVVVTVSVYKHGEKPRADAVQM
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaatagtaacggagcgctgccaggaggagcagatggagcagatgtctcac
ggcatgcagatgtcgtcccagatcaagaagagaaagttcaaatccagtgatgaaatggcc
tctctgagtgaattctatcccatcattcccggtgacgtcatgtctgtgaaagagatcctg
cccggacccaagttcccacgccaccgaacatgggaggtcctgagagagacactgtccaat
gatgagctccacgagagggaccagtggacaatgttcgggaacgaggttgagaaactggag
atcggtgtgatcagaaaccagcgtgtggtccgtgagcgcgtggatcgattcgctctgcgc
cgggaggcggagagaaaagcttcattgcacatgaagtatattgaggatttgagcatgaag
gctcctgatttcccgatcccgctgcggccgcacacagtgtgggctgggatggacgtcaaa
ctgtcctgttcagttgaaggctgcccgactcccagcatcacatggtataaggacgacgtt
cctctccgaggagctctgccgtggaactacaagctgtcgcagaagttcggcctcaatgtt
ttagagatcaggagatgttctgctgaagatgccggagaatttaaggtcatagtgaaaagt
tctctgggagaggcgacatccagcgccagactgattgtcaactctcatgaaggggccgag
gccaaactgaagcgctcttggacgcccatcccagttccagagccggacgctcagctggcc
tccacctttcctccaacatttgtgatagaaggtgacaatttggttctacagtgcagtttc
acctccgctttactgcccttccaacaggatgtgacctggtatagagatgggcttgtgttg
cgtcagtccagtcgtgtggagatgcagacaggtctgcgatctgccagtctcaccctgaag
cgagtgcacaaggaacatgaagggctgtacagcgtccgcctgcgcacctgggacgggagt
gtcgagcacagcgcctacgtctatgtcaaagatggacctgcggttgtggtcggagctcca
ggttctcctctaaagctgaagtgttctgatgtgaaccgggattacgtgttcctctcatgg
attcctcccagcgcagacggagccgctgctgtgcagggttacttcatagagaggtgtgaa
atcggtgttgggaagtgggaacgctgtaatgacgtcgtccagagggagtgccattatccc
ataatgggactgaaggaaaacacaatgtaccagttccgcgtgtgcgcagtgaatcaggca
ggcgtgggccgcccgtctagacccaccaaccccgtcctgacctctgaccccctggagccc
agcaggactacggtggtgaaggtggagcgcgggagagagattgtgatcactaaggaccag
ctggagggtcaaatccgagtgccgttctcccccaccgacgtgcgagtttgcgagctcagc
gacacctacgccgtgctgagctggaccgaaccggatccgcggggcagagagcctctcacc
tacttcgtggagcggtccctaacagggaaggagagctggcatctggccagtatggatatg
acggttctgtctacgaaatttgttgtgtttgaccagcagaaggggaagtcgtacatttac
cgtgttcgttctgtcaacaagtacggcatcagcgaaccgtctcttcccagcgaacccgtc
tcactgggacaaccactaggagttcccgccccaccgcacggcatcctgtccatccgagac
accaacagctcagtcttgctgcagtggaaggagcccaaagtaacagagggcattgtggga
tactatctgtactgcagtgaggttggaagtggacagtggaagaccatcaacaataaaccc
atcaccaaaaccaggtttacagttgacggcctgaagaccaataaagaatatgtattccga
gtgaagtctgtgggagtggcgggaaacagcgtctactctgaagagtgtcctgccattcga
gtcaaatctgcaatatatgttccatcccgtccatccgccatcgctctattgcactgcacc
ggacgagagatgatgattggctggagagcaccggccaatcacggaggagacccagtgcgc
ggctactacctggatcagagggaaaaatcccagagcacctggagagaaatcaacatcaaa
cccgctaaagaaagagtctatgaggtgacaggccttcaggaaggacatttttaccagttc
cgtgtcttcgcggccaacatcgttggattgggtgacgcttctgaacccagcgaactgttt
ctgtgtgagcgctggacgatgcctgagcctggttgtccgtatgatctggaatttagagaa
gtgaggcgaaactctcttgtgctgctgtgggcggagcctatatacaagggccaatcagac
atcagtgggtatatagtggagatcagtgagggggcggagtctgaggattggacccctgtg
acgagtgagccggtgacagaaactcacttaaaggtttcaggtctgcaagcaggtcagacg
taccgcctccgtgtgtctgccattaacgcagctggagtcggcatgtcttcgatggcgtct
gagccggtggaagcgcagactaaagcaggaaccaaagagattgaaatcggagtggataat
gacggcttcatcttcctgagctttgaaattcctgaaggcaccgataaagacgtctttaag
tggagtaagaactacgggaaagcgattgatgctggacgagcacgattggagaacaaaaac
aacaggtctgttcttaccttcacggacgcctcggagcaggatttgggcctttacacggtg
gagcagagctcaaaccccgacgtctcctctagtttcaccttcactgcggaggatctggag
aggttgacagaactcagctggcacgtcagaaacccactgatcgccctgaagtctgaaggt
tggcagattgacgtgtcggagcagggaaatgtccgtctgtggctgcagaccgaacctctc
agcagcgccgccgttcttcggctcatcctcaatgacagagagatctccagtacaccgaca
cgtaagattaactttgacaaggcaaacggtctggtggagatcctgtttgatcaaatatca
agagacgaagagggttcgtacaccgcgcagctcaaagacggccgggccaagaaccagttc
acgctggtgtttgtggataagaagtttcaggaaacactggccaaatctcaggccaacaga
cgcaactggaagagaaagtcgggtccccatttcaaggagtttttgtcatggacagtgact
tcagattgtgaaatgattatgaagtgtaaggtcaccaatgtgagcaaagacacgcgtgtg
aagtggtttaaggacggaatggagcttcctcaggcggtgtacgagcccacgggcgtctgc
accctcatcataccgcaggtgacgaggaaggagctgggtgtgtataaagtcgtagtgtcc
gacaacagaggagaagatgagaccgtcctggaaatgatagatgacgagtttgagcgtctg
atgcagcagctcagtaaacagtgcgcgctctctgctggtccggtgtacatccagtgcact
gcgcagggcttcaaactctactgctccctcaaatactacctgacctacatgaaaaccagc
tggtacttcaaggagaagagaattgacttggaggagcggacaaagccaggcagcagcatg
cagaaggtttggattgagatattcaaccccactgaaaatgataaagggaagtacaccctg
gagatgttcgacggccaggaaacacacaggcgctttctggatctgtctggacaagctttc
gcagatgctttgctggaataccagagactgaagcaagtggagtttgctgagaaaaatcga
gccagagtcacaaagggccttccagatgttgtggccataatggaaaccaagtctctgtgt
ctgacgtgttttgccgacggcgatcccgtgccggaaatgttctggctgaagaacgacaga
gaaatcatctccgccggccagtataacatcaaaaacgagaataaatcctccactctcacc
ataaaccacgtgaccatggaggactcgggcaactatagcatcttcgtgcgcaataaacac
ggatcgcagacggtcgtcgtgaccgtcagtgtgtataaacacggtgaaaagcctcgagca
gatgccgtgcaaatgtaa
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