Labeo rohita (rohu): 127178379
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Entry
127178379 CDS
T09007
Symbol
hdac9b
Name
(RefSeq) histone deacetylase 9-B isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127178379 (hdac9b)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127178379 (hdac9b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127178379 (hdac9b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
127178379
NCBI-ProteinID:
XP_050987181
LinkDB
All DBs
Position
16:complement(26068979..26147095)
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AA seq
642 aa
AA seq
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MSAVRTQAALCKELSQVRINIPSIIPGCLGSSVCCTRESRSCHFKLGSLPKSTVTTTNQV
DIKPEVPLALDPGSPLDLRTDVRMQGSGSDPTVWERQLQQELLLIQKQQQIQKQLLISEF
QKQHENLVRQHQAQIQEHLKLQQELLAMKQQQEQLEKERKLELQSQERELERHRREQQVL
VLRNRDKSRESAVASTEVKQKLQEFLLSKSTKDGTPNGVPQKIAQSSKLWYTASHHTSLE
QSSPPLGGASSSCKISLPSPQDSRDDFPLRKTVSEPNLKVRSRLKQKVAERRSSPLLRRK
EGSIMTPFKKRALELLESTASSSAPGSGPSSPNGACSALGAENGPSSLPVTTRTERWPSQ
PRLLGPESSVSVLNLYTSPSLPNISLGLSAASSPISAALGFQEKHVEGGGVSAVIQGLPT
QLLGPVPLSVAMETKVSSSHQALLQHLLQKEQLRHQKILSTGQSPVHPPSPLAMMESSPS
STRPKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQNFLEKQKQYQQQVHINKMLSKSIEQ
LRQPNVHLQESEEEEGEDFHDQAMQEDSSPSAGVIRKHSPDSIRSNTSVSPVGPLDTHPG
VIRVKEEPIASDDETMVTQSLADKQSSYIHQVKGRVVIQAMI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgtaagaacacaggctgctctttgtaaagagctctctcaagtcagaattaat
attccctctatcattccaggatgcttagggtcatctgtttgctgcaccagagagagccgc
tcctgtcacttcaaactcggctctcttccaaaaagtaccgtcacgacaacaaaccaagtg
gacattaagccagaggttccactggctcttgatccaggctccccgttggatctgcgtaca
gacgtgaggatgcagggttctggttcagatcccactgtgtgggaaagacaacttcaacaa
gagctgctcctcattcagaaacagcagcagattcaaaaacagttactcatcagcgagttc
cagaaacagcatgagaacctggttcgccagcatcaggcccagatacaggagcatttgaag
ttgcagcaggagcttcttgctatgaagcaacaacaggagcagctggagaaagagaggaaa
ctagagctccagagtcaggagagagaattggagagacatcggcgtgaacaacaagtcctg
gtcctccgcaacagagacaagagcagagagagtgcggtggccagcactgaggtcaagcag
aaactccaagagtttctgttgagtaaatccaccaaagacggtacacctaatggggtcccc
cagaaaatcgcacagagctccaaactgtggtacacggcctcccatcacacctctctggag
caaagttcacctcctttgggaggagcgtcctcctcctgcaagatctccctgccctccccg
caagactcccgggacgactttcctctgaggaagacagtctcagagcccaatctgaaggtg
cggtccaggttaaagcagaaggttgcagagaggaggagcagcccactgcttaggaggaag
gaggggagcatcatgacacccttcaaaaagagagccttggagcttctggaatccacagcc
agcagcagtgcaccgggatcagggcccagttcacccaacggggcctgcagtgccttgggg
gctgaaaacggaccctcctctctcccagtcaccacacgtactgagcggtggccatcacag
ccgaggttattagggcctgaaagctcggtgtctgtgttaaatctctatacgtctccatcg
ctgcccaatatctccctgggtctctcggctgcctcttctcccataagcgctgctttagga
tttcaagagaagcatgttgagggtggtggtgtatcagcggtcattcagggtttgcccacc
caacttctgggtccagtccccttgtctgttgcgatggagaccaaagtgagcagcagccac
caagctctcttgcagcacctcctccagaaagagcaactccgccaccaaaagatcctctct
actggtcaaagtcctgtgcatcctccttctccgttggccatgatggaaagctctccgagc
agcacccgacccaaactgccccgtcaccggcccttaaatcgaacccaatcggctccgctg
ccccagagcacactagctcaacttgtgattcagcagcaacaccagaacttcctggagaaa
cagaaacagtaccagcaacaggtccacatcaacaagatgctttcgaaatcaatcgagcag
cttcgtcagccaaacgtccacctgcaggagtcggaggaggaagagggagaggattttcat
gaccaggccatgcaggaggacagctcgccctctgctggcgtcatcaggaagcacagcccc
gacagcatccgcagcaacacctccgtttcacccgtagggccactggacactcatcccgga
gtcatccgggtgaaagaggagcccattgccagtgatgatgagacaatggtcactcagagc
ctggccgacaagcagagctcctacattcaccaggttaaagggagggtggtgatccaggcc
atgatatga
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