Labeo rohita (rohu): 127178420
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Entry
127178420 CDS
T09007
Symbol
adgrb1a
Name
(RefSeq) LOW QUALITY PROTEIN: adhesion G protein-coupled receptor B1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04115
p53 signaling pathway
lroh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127178420 (adgrb1a)
09143 Cell growth and death
04115 p53 signaling pathway
127178420 (adgrb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127178420 (adgrb1a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178420 (adgrb1a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lroh04030
]
127178420 (adgrb1a)
Peptidases and inhibitors [BR:
lroh01002
]
Mixed peptidases
Family P2
127178420 (adgrb1a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Others
127178420 (adgrb1a)
G protein-coupled receptors [BR:
lroh04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
127178420 (adgrb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
GPS
TSP1_CFP_C
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127178420
NCBI-ProteinID:
XP_050987243
LinkDB
All DBs
Position
16:10930294..11036831
Genome browser
AA seq
1552 aa
AA seq
DB search
MISKLLRNCSSLVLLLPLLQLLRLDMLNAAPSGPESDTCSTLVQSRFFGFFLSSSVFPST
PCSWTLQNPDPRRYTIFIKVTKPSRDCIPRQHRTFQFDSFLETTRTFLGMESFDEVVKLC
DASTHVAFLEAGKQFLQIRKGLPRAGAGSRNGDGEFKVEYLVVGKRNPSMAACQMLCQWL
EDCLTYSTSNRPCGIMQTPCQCWDQPPPDKETNGCYRDGVYLENCIPVVKEVTADTDTSG
GWSVWGNWAECSSECGGGVQTRTRTCQSPPEEAYLCEGILEEGRPCNSQPCIGTGRLGTR
SQSLRSVDSRKREDSDKTRSGQQSSQTVDPTSGGEWSVWSACSTTCGEGWQSRTRLCVSV
PYSTQCSGPLREQRPCNNTLVCPVHGSWDEWTPWSLCSSTCGRGYRDRTRSCKKPLFGGS
DCEGPEKQTKFCNIAVCPVDGVWNEWSSWSSCSSTCSNGTMQRTRECNGPSYGGLECQGE
WRQTRDCFLRECPVDGQWQLWSSWAGCTKTCGGGSQQRQRVCYGPFFGGEPCPGDREEVR
RCNEKRCPEPHEICDEENFSNVVWKKTPAGDTAAVRCPPNAVGLILRRCSLDDEGIAYWE
NPTYMKCVSNDYRSIQTLTRDHLSKAQRGLVGDGVSEVMTKLRVTSSDGTSYSGDLLAII
DVLKNMTEIFRRSYYSPSNADMRNFVQSVSNLLMEENRDRWEEAQLLGPNVKELFRLVED
FVDVISLRMKDFQDTYEVTDNLVLSIHKRPVAGNADITFPMKGWRGMVDWARNSEDKVRV
AKNILVTGKPDEDDASAFVTGIVLYRNLGSILSLQRNSTVLNSKVISVTIKPTPSSLSTP
LEIEFSHLYNGTTNQTCISWDENDSSSLLGSWSARGCRAVPVDSSTTKCLCDRLSTFAIL
ARLNPDVNMDKTQLPSVTLIVGCGVSSLTLLLLIIIYVSVWRYIRSERSVILINFCLSII
SSNALILIGQTQTRNKVVCTLVAAFLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKR
FLCLGWGLPALVVAISVGFTKAKGYGTVNYCWLSLEGGLLYAFVGPAAAVVLVNMVIGIL
VFNKLVSKDGITDMKLKERAGASLWSSCVVLPLLALTWMSAVLAITDRRSALFQILFAVF
DSLEGFVIVMVHCILRREVQEAVKCRVVDRQEDGNGDSGGSFQNGHAQLMTDFEKDVDMA
CRSGTLKRPSQQGEEKVASQQITVQKGSNFNTLPASMAKVHLQNVADYASHTLTMRRDKG
GIAGVSTELPGAKSIYICDGELFKQLDGAPGDSSGPEGGGGGGGSGQGYVLLPNNNNTLR
PAKGGKDDQATKYNISIEQLPQTRLIHLANPAGTDPVPGFGLKSLPTDRVSVSCSERDSP
VQTVQNISSESQMTTTCEQGDSGNSGMMSKSETVSTLSMSSLERRKSRYAELDFEKIMHT
RKRHQDMFQDLNRKLQHAEKDRDSPPSGRETGKRWSVSSGGSDKTNLSDKQQTPSKRAWE
GIRKTHSPPSWVRKELEPLQASPLEMQAVEWEKASATIPLVGQEIMDLQTEV
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaaactcttacggaattgttcatcgttggtcctgcttttgcctcttctccaa
ctgctgcggctggacatgctcaacgctgccccctctggtccggagtctgacacctgctcc
acactggtccagagccgcttctttggattcttcctctcgtcttcggtatttcccagcacg
ccctgctcctggaccctgcagaaccccgacccacggcgctacaccatcttcatcaaggtc
acaaaaccatctagggactgcattccccgacagcaccggaccttccagtttgactccttc
ttggagacgacacgaaccttcctcgggatggagagcttcgacgaggtggtgaagctgtgt
gatgcctctacccacgttgccttcctggaggccggaaaacaattcctgcagatccggaaa
gggctgcccagagcgggtgctggatccaggaacggcgatggggaatttaaggtggagtat
ctcgtagttgggaagcgtaaccccagcatggctgcctgtcaaatgctgtgccaatggttg
gaggactgcctgacctacagtacctccaaccggccctgtggcatcatgcaaacaccgtgc
caatgttgggaccagcctccgccagacaaagaaaccaatgggtgctatcgggacggggtc
tacttggaaaactgcatccctgttgtgaaagaagtaacagctgacactgacacaagcggt
ggctggagtgtgtggggcaactgggcagagtgcagcagcgaatgtggaggcggagtccag
acgcgcacacgcacctgtcagtcaccacctgaggaggcgtacctgtgcgagggcattctg
gaagaaggtcgtccctgcaactctcagccgtgcatcggcacaggccgacttggcactcgt
agccaatccctgcgctcggtggacagccgtaagcgagaggactctgataagacccgcagc
ggacagcagtcttcccaaacagtggatcctacgtcgggtggggagtggtctgtgtggagc
gcgtgttcgaccacgtgcggtgagggctggcagagccgcactcgcttatgtgtctccgtg
ccatacagcacgcagtgcagcggaccgctgcgtgaacagagaccctgcaataacactctt
gtgtgtccagtgcatgggtcgtgggatgagtggactccatggagcttgtgttcttcaacg
tgtggccgtggatacagggaccgcactcgctcctgcaagaagccgctgtttggaggaagc
gactgcgaaggtccagagaaacagaccaaattctgcaacattgctgtatgcccagtggat
ggtgtgtggaatgagtggtccagctggagttcctgttcctcgacctgttcaaatggaaca
atgcagcgcactcgggagtgtaacgggccctcgtatgggggcctagagtgtcagggcgag
tggcgtcagacaagagactgcttccttagagagtgtcctgtggatggtcaatggcagctc
tggagctcttgggctggttgtaccaaaacatgtggtggaggaagccagcaaagacagaga
gtgtgttacggtcctttttttggcggggagccgtgcccaggggacagagaggaagttaga
cgttgcaatgagaagagatgtccagagccgcatgagatctgtgacgaggagaatttctct
aatgttgtgtggaagaaaactcctgcaggggacactgcagctgtccgctgccctccgaat
gctgtaggattaattcttcggcgatgttcgttggatgatgagggcattgcgtactgggaa
aacccaacgtacatgaaatgcgtctcaaatgattaccgaagtatccaaacactgaccaga
gatcacctgtccaaggctcaacgagggcttgtaggagacggggtctctgaagtcatgacc
aagctgagagtgacgtctagtgatggaacaagctacagcggagatcttctggctatcata
gatgtactgaaaaacatgacagagatatttaggagatcctactacagccccagtaatgca
gatatgaggaattttgtgcagtctgtgagtaacttactgatggaggaaaacagggacagg
tgggaggaagcacaactgcttgggcccaatgttaaggagctttttcgtctagtggaggac
tttgtggacgtcataagtctccgcatgaaggacttccaggatacttatgaggtcaccgac
aatctcgtgttgagtattcacaagcggcctgtcgcaggaaatgcagatatcactttcccc
atgaaggggtggagggggatggtggactgggctcgcaactctgaagacaaagtcagagtg
gctaaaaacattctagtcactggaaaaccagatgaagatgacgcctcagcctttgtgact
ggaatcgtgctgtacagaaacttgggcagtattctctctctacaaagaaatagcacagtg
ctgaactccaaggtgatctctgtgacaatcaaacccactcccagctccctctcaactcca
ctagagattgagttctcacacctttacaatggtaccacaaaccaaacctgcatttcctgg
gatgagaatgacagctcgtcgttgctgggctcctggtctgcgcgaggctgtagagccgtg
cccgtcgactccagcacaaccaaatgcttgtgtgacagactctccaccttcgccatttta
gcacgcctcaatcccgatgtgaacatggataagacccagcttccatctgtgactctgatc
gtgggctgcggggtctcgtccctcaccctgctcctcctcatcatcatctatgtgtccgtt
tggaggtacatccgctcagaacgctctgtcatcctcatcaacttttgtctgtccatcatc
tcctccaatgcactcatactcatcggacaaactcagacacggaacaaggttgtttgtact
cttgtggctgcatttctacacttcttcttcctgtcctctttctgttgggttcttacggag
gcatggcagtcttacatggctgtgactggccgtcttagaaaccgcatcatacgcaagcgt
ttcctctgccttggttggggtttacctgctctcgttgtagcaatttctgttggattcacc
aaggcaaagggatatggcactgttaactattgctggctgtctctggaaggcggactgttg
tacgcatttgtgggaccagctgctgctgtcgtcttggttaacatggttatcgggattctg
gtttttaacaaactggtgtctaaagatggcataactgatatgaaactcaaggagagggcc
ggggcgtcgctgtggagctcctgcgttgtactgccactgctggctcttacttggatgtcg
gcggtcttggcaatcactgaccgccgttcagccttgtttcagatcctttttgccgtcttt
gactccctcgaggggttcgttatcgtgatggtgcattgcatcctacgcagagaggttcaa
gaggcagtaaagtgtcgtgttgttgatcgtcaagaagatggaaacggtgactctggtgga
tctttccagaacggccatgctcagctgatgaccgactttgaaaaggatgtggacatggct
tgccgatcaggcaccctaaagcgtccctcccaacaaggtgaagagaaggtagcttcacaa
cagatcacggtacaaaaaggctccaacttcaacacccttcctgcgagcatggctaaggtt
cacctgcaaaacgtcgccgactacgccagccacactctcaccatgcgtcgcgacaaaggc
ggcattgccggggtcagtacagagctacccggagctaaatctatttacatctgtgatggc
gagctgttcaaacaacttgacggagccccgggagacagcagcggtcccgaaggaggaggc
ggcggaggagggtcgggtcagggttacgtgctcttgcccaataacaacaacacccttagg
cccgcaaagggcggtaaggacgaccaagcaaccaagtacaacatcagcattgaacagtta
ccccagaccaggctcatccacctggccaaccccgctggcaccgatcctgtgccaggcttc
gggttgaaaagccttcctaccgaccgagtcagcgtttcctgctcagaaagggattccccg
gtgcagacagtgcagaacatctccagcgagtcccagatgacaaccacatgtgagcaaggg
gactctgggaactctgggatgatgtctaaaagcgagactgtctccacactgtctatgagc
tctttggagagacgaaaatcacgctatgcagagctggactttgagaagatcatgcataca
cggaagcgccaccaggacatgttccaggacttaaacaggaagctgcagcatgcagagaag
gacagagattctccccccagtggaagggaaactgggaagagatggagcgtgtcatcagga
ggcagcgataaaactaatcttagtgacaagcagcagactcccagtaagcgggcgtgggag
ggcatcaggaagacccactcgcccccatcatgggtgcgtaaggagctggagcccctacag
gcctctcctctggagatgcaagcggtggagtgggagaaggccagtgccaccatccctctg
gtgggccaagagatcatggacctgcagacggaggtctga
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