Labeo rohita (rohu): 127178444
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Entry
127178444 CDS
T09007
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178444 (rnf115a)
04121 Ubiquitin system [BR:
lroh04121
]
127178444 (rnf115a)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127178444 (rnf115a)
Membrane trafficking [BR:
lroh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127178444 (rnf115a)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127178444 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-C3HC4_3
zf-RING_16
C1_2
zf-RING-like
HypA
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127178444
NCBI-ProteinID:
XP_050987281
LinkDB
All DBs
Position
16:complement(24139332..24153420)
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AA seq
310 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNSLDDTAS
QFAELWQLLFVERPFSLDLDSPDSERVPGGGSGSGSLGTGPFGGSVPGGLGGSLGGPLGG
GEHWGPGRPPRLHTPRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIITQEHTDCNMECPV
CKEDYTVGEPVRQLPCNHIFHSDCIVPWLELHDTCPVCRKSLNGDDSSTQSSAEPSSLNT
DPRTPERWSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggtccctccgcatcgcttcttctgtcactgttgtaagggtgaa
gtgagccccaaactgccggagtatatctgtcccagatgtgactcgggcttcatcgaggag
gttacagaagactccagtcttctggacagtagttcaaatagccttgatgacacagcttca
cagtttgccgagctatggcagctgttgtttgtggagaggccgttcagtttggatctcgac
agtcctgactcggagcgggtccctggagggggcagtgggtctgggagtctcggaacaggg
ccgtttggcggttctgtcccaggagggcttggtgggtccctgggtggccctctcggcgga
ggagagcactggggtcctggtcgtcctccacgtctgcacactccgaggaggtaccgatcc
agaggaagcagtcgaccggatcgctctcccgctgttgagggaatagtacagcagtttctc
gcaggcctttttgccaattcaggagtaccaggctcccctccactgtcatggacgggcatg
ctgcactcaaaccctggggactacgcctggggacaggggggtctggatgcagtcatcaca
cagttattgggtcagtttgagaacacgggtcctcctcctgctgagaaagagaaaatttcc
tccctccccactgttatcatcactcaggaacacactgactgcaatatggagtgccctgta
tgtaaggaagactacacggtcggtgagccggtcaggcagctgccctgtaaccacatcttc
catagtgactgcatcgtgccctggcttgaactgcacgacacgtgtcctgtttgcaggaag
agcctgaatggggatgacagcagcactcagtcctcagcagagccttcctccctaaacact
gatcctcgcacaccggagagatggtccttctga
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