Labeo rohita (rohu): 127178508
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Entry
127178508 CDS
T09007
Symbol
scnm1
Name
(RefSeq) sodium channel modifier 1
KO
K24827
sodium channel modifier 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127178508 (scnm1)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
127178508 (scnm1)
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Gene cluster
GFIT
Motif
Pfam:
SCNM1_acidic
zf-SCNM1
ATP_bind_3
Motif
Other DBs
NCBI-GeneID:
127178508
NCBI-ProteinID:
XP_050987378
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Position
16:15986491..15989461
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AA seq
255 aa
AA seq
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MSFKREGDDQCQLNVLKKRRVADLLSNFIPDDEATLMKNGRYSCLVCSHRPVFDTVDMLM
VHRKGKRHLEGMKWFYGKKNDMQREIDKRRHQDYVKTEDERQEPSSSAPLLSQTRKITHH
ALLRTAPYSSCHRKASERMESSGCDQEDRKDQINISSSTQSSIRTESIGSISTTSTIVHQ
GQTEGKGVTKKKKNGSRNVCEPITEERRRELEHYLKLKSSGWLQDRSGKWVKDENVEFDS
DEEEPDLLPPCSESS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaaagggagggtgatgatcagtgtcagctgaatgtactgaagaaacgacgt
gttgcagatcttctgtctaacttcatcccagatgatgaagctactctgatgaaaaacgga
agatacagctgccttgtgtgttctcaccgtcctgtgtttgacactgttgatatgctcatg
gtgcacaggaagggaaagcgacaccttgaaggaatgaaatggttctacgggaaaaagaac
gacatgcaacgtgaaattgataaaagaagacatcaagactatgttaaaacagaagatgag
cgacaggaaccctccagttcagctcctcttctgagccaaacacgtaaaattacccatcat
gccctactcagaactgctccatacagtagctgccacagaaaggccagtgaacgaatggaa
tcgtcaggatgtgatcaagaagataggaaagatcaaatcaatatcagctcatcaactcaa
tcatccattaggacagaaagtattggctccatatcaacaactagtacaatagtgcatcag
ggacagactgaagggaaaggagtgacaaaaaagaagaagaacggatccaggaatgtgtgt
gagcctataaccgaggagagacgcagagaactggaacactacctcaaattaaaaagttcg
ggatggctgcaggacagaagtggtaaatgggttaaagatgaaaatgttgagtttgactcg
gatgaagaagaaccggatctgttgcctccttgcagtgaatcttcatag
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