Labeo rohita (rohu): 127178532
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Entry
127178532 CDS
T09007
Symbol
scn1ba
Name
(RefSeq) sodium channel, voltage-gated, type I, beta a isoform X1
KO
K04845
voltage-gated sodium channel type I beta
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
127178532 (scn1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127178532 (scn1ba)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127178532 (scn1ba)
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Motif
Pfam:
V-set
ig
Ig_3
Phage_zn_bind_6
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
127178532
NCBI-ProteinID:
XP_050987421
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Position
16:complement(8408919..8430855)
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AA seq
223 aa
AA seq
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MKSSRCVGVSVTDSFVLSVAWLCNGACVEVDSDTEAVTGHGFKMSCISCKMRGEVPASAT
VDWWFMAKGESEFSHIYSYADMTGYIMDDRFDERLAWNGSKKTEDVQDGSIYILNVTFND
TGTYRCFFDRILVFTNYEHRTNATKFINLNVVGKATRGMASILSEIMMYVSIIGLQLWLV
VEMVYCYRKIAAAGEEALRESEAEYLAITTESKDNCAGVAVAE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaagcagatgtgtcggtgtttctgtcactgactcttttgttctttctgtagct
tggctctgcaatggggcgtgtgtggaagtggactccgacacggaggcagtgacgggtcac
ggcttcaaaatgagctgcatctcttgcaagatgagaggggaagtaccagcctccgccaca
gtggactggtggttcatggccaaaggcgagagtgaattttcacatatctacagttatgca
gatatgacagggtacataatggatgaccgcttcgatgaacgcctagcctggaacggcagt
aaaaaaaccgaggacgtgcaggatggttcgatttacatccttaacgtcaccttcaacgac
accggcacctatcgatgcttcttcgaccgcatcctggtcttcaccaattacgagcaccgc
accaacgccaccaagtttatcaacctcaatgtagtaggcaaagctacacgaggcatggcg
tccatcctatccgagatcatgatgtacgtgtccatcatcgggctgcagttgtggctggtg
gtggagatggtctactgttacaggaagattgcagcagccggagaggaagctctgagagag
agcgaggcggaatatttagctataaccacggagagcaaagataattgtgcaggtgtagcg
gtggcagaataa
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