Labeo rohita (rohu): 127178539
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Entry
127178539 CDS
T09007
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127178539
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127178539
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127178539
NCBI-ProteinID:
XP_050987434
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Position
16:1496757..1584693
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AA seq
601 aa
AA seq
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MSKEARPSWDSPMQFVLACVSYAVGLGNVWRFPYLCQMHGGGGFLIPYLLMLVLEGIPLF
CMELAIGQKMRLGSIGAWTAISPYLGGLGIASVVTSMYLCLYYNVINAWSFWYLFHSFQS
VLPWAECPINTNRTGYLEECEVASPTQYFFYRETLNISSSIDENGGIHMGQALCLLLAWI
IVYLFIVRGVKSTGMVVYFTATFPYVVLIIYLIRGVTLHGAWNGVKYMFTPKLEQLANPQ
TWINAATQIFFSLGLGFGSLIAFASYNHHNNNFERQAVAVSLINSGTSVFASVVTFAIYG
FKATFNYESCLERMRLLMLNTFDLSEETISAENVTEWIHHLNVTYPEKFASIASKIEDCS
LQAELDTAVEGTGLAFIVYSEAIKNMPLSQLWSVLYFVMLLLLGMGSMLGNVTAIITPLG
DIKFLSRTLSNETINGLVCLLCLLLGFGFTSRSGNYWFTIFNEYAATLSLLFIVFIEVVS
VCYVYGLRRFEKDIEDMLGHRPNWYWKVMWAAISPLLLFSLFIFYIINYIQGGTPTYQAW
DKNLGKSVVQEYPVYGQAFIALLLASSLSCVPLAALYAACRKKQRGTSLRQHAVNTVTST
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaagcccgtccgtcctgggacagtcccatgcagtttgtcctggcgtgtgtg
tcttatgctgtgggactcgggaacgtctggcgttttccgtatctctgtcaaatgcatgga
ggaggtggttttctcatcccgtatctgctgatgttggttctggaggggattcctctcttc
tgtatggagctggccatcggtcagaagatgcgtttgggcagcatcggcgcgtggacggcc
atcagcccatatctgggtggactgggcatagccagtgttgtgacctccatgtacctgtgt
ctgtactacaacgtcatcaacgcctggagcttctggtatctcttccattcatttcagtcg
gtgctgccgtgggccgagtgtcccatcaacaccaaccggacggggtatctggaggagtgt
gaggtggcgtcacccactcagtacttcttctaccgcgagacgctgaacatctcgtcatct
atcgatgagaacggaggcattcacatggggcaggcactctgtctgctgctggcctggatc
atcgtctacctcttcatcgtcagaggtgtcaaatccaccggcatggtggtttatttcaca
gctacgtttccgtacgtggttctgatcatctatctgattcgaggcgtcactcttcacgga
gcctggaatggggtcaagtacatgttcacacctaaactggagcagctggcgaatcctcag
acgtggatcaacgcggccactcagatcttcttctctctgggtttgggcttcggctccttg
atcgctttcgccagttacaatcatcacaacaacaacttcgagaggcaggcggtggccgtc
tcgctcatcaacagcggcacgtctgtgttcgccagcgtcgtcaccttcgccatctacggc
tttaaggccacgttcaactacgagagctgtttggaaaggatgaggctgctgatgctcaac
acgttcgatctgtcggaggaaaccatcagcgctgagaacgtcacagagtggattcatcat
ctgaacgtcacctatcccgagaagtttgcgtccatcgcttcaaagatcgaggactgcagt
ctgcaggctgaattggacacggcggtggagggcacgggtttggcgtttatcgtgtacagc
gaggccattaagaacatgccgctgtctcagctctggtcggtgctgtacttcgtcatgctg
ctgctcttagggatggggagcatgctgggaaacgtcacggccatcatcacgccgcttgga
gacatcaagttcctgtcccgcacgctcagcaacgagaccattaacggtctggtttgtctt
ctctgtttactcctgggtttcggtttcaccagccgatcaggaaactactggttcaccatc
ttcaatgaatacgcggccacactgtcgctgctcttcatcgtcttcattgaagtggtcagt
gtgtgttacgtctacggactgagaaggtttgagaaggacatcgaggacatgttgggtcat
cggccgaactggtactggaaggtgatgtgggcggccatcagtcctctgctcctcttcagc
ctcttcatcttctacatcattaactacatccagggtgggacgcccacttaccaggcctgg
gacaaaaatctgggtaagtcggtggtgcaggagtatccggtgtacggtcaggcgttcatc
gctctgctgctggcgtcgtcgctcagctgtgtgccgctcgccgctctctacgccgcctgc
aggaagaagcagcgaggaacgtcgctccgccaacacgccgtcaacaccgtcacgtccacc
gtttag
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