Labeo rohita (rohu): 127178541
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Entry
127178541 CDS
T09007
Symbol
smpd5
Name
(RefSeq) sphingomyelin phosphodiesterase 5
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00600
Sphingolipid metabolism
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
127178541 (smpd5)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
127178541 (smpd5)
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Paralog
GFIT
Motif
Pfam:
nSMase_N
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
127178541
NCBI-ProteinID:
XP_050987436
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All DBs
Position
16:complement(1558186..1569701)
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AA seq
546 aa
AA seq
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MSLRASPFPNFFLEGLHAVGWGLIFPCFWFLDRLLATCISTSLERMWRREMECYLHPLQV
VFGSVLFFILFIISTPFALLGFILWAPLQAVRRPFAYHHQEQIIPMENRNARWEETGKVS
FGFLTGNLCLLPDGIARFNNLGHTQKRAVYIGKSMVQGITRPHIRIFVDSPSSCGTVTPS
SSLIPQPAPSSYGSVDVSAANQTEDVPETDGLPKPNSNQNSNQHKNPPQTLLRDADVPLE
VSALFPSSVDVVCLQEVFDKRAALKLAGALGPLYGHVLYDVGGYACQPAGTCSSFKFFNS
GLFLASRYPVMEAEYHCFPNGRGEDALAAKGLLAVKVEIGLRKDEKKMVGYINCTHLHAP
EGDGEIRVEQLNMLTKWINEFQAVTRRDDELVMFDVLCGDFNFDNCSPDDRLEQSHSVFE
DYTDPCRAGAGREKPWVIGTLLEQPTLYDENVRTPDNLQRTLETEELRKDYISPPVAIAG
VPLVYPEPDQPWIGRRIDYLLYRESPVSSRCKTELEEFTYVTQLAGLTDHIPLGFRLSVS
LDSHAV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaagagcgtctcctttccccaatttctttctggaaggtctccatgcggtagga
tggggtctgatcttcccttgtttctggttcctggaccgtcttctggccacctgcatctcc
accagtctggagcgcatgtggcggcgcgaaatggagtgctacctccacccgcttcaggtc
gtcttcgggtccgtcctcttcttcatcctgttcataatctccacaccgttcgccctgcta
gggttcatactgtgggctccgctgcaggccgtacgccggccgttcgcgtaccaccatcaa
gagcagatcattcccatggagaatcgcaacgctagatgggaagagacggggaaagtcagc
ttcgggtttttgacgggaaacctgtgcttgcttcccgacggcatcgcacgcttcaacaac
ctcgggcacacgcaaaaacgtgcggtgtacatcggtaaaagcatggttcagggcatcacg
cgccctcacatccgtatcttcgtcgattctcccagcagctgcggaacggttactccgtcc
agcagtttgatcccacaaccggcaccgtcctcgtatggatccgtagatgtttctgcagcc
aatcagacggaagatgtacctgaaaccgacggccttcccaaacccaactccaatcagaac
tccaaccagcacaagaatccacctcagacgctcttacgggacgcagatgtgccgttggaa
gtgtccgctctgtttccgtcctccgtggacgtcgtgtgtctccaggaggttttcgataaa
agagccgctctgaagctcgcgggggctctcggtccgctctacggacatgtgctctacgac
gtcggtggttacgcttgtcaacctgctggaacgtgctcgtcttttaagttttttaacagc
ggtttgttcttggctagtcgctatcccgtgatggaggctgagtatcactgctttccaaat
ggtcggggagaagatgctctggctgccaaaggcctgctcgccgtaaaggtggaaatcggc
ttacgaaaagacgagaagaaaatggtcgggtatattaactgcactcacctgcacgctcct
gaaggggacggagagattcgtgttgagcagctgaacatgttgaccaaatggatcaatgag
ttccaggcagtgaccagacgagacgatgagctggtgatgtttgatgtgctttgtggcgac
tttaactttgacaactgctctcctgacgacaggctggagcaaagccacagtgtgtttgag
gactatacggatccctgcagagccggagccgggagagagaagccctgggtcatcggaacc
ctgttggaacagccgacgctctacgatgagaacgtacggacaccagacaacctgcagcgg
actctagagaccgaagaactgcgtaaggactatatttctccaccggtggccatcgcaggt
gttcctctggtgtatcccgagcccgatcagccctggatcggccgacgcatcgattacctc
ctgtatcgagaaagccccgtctccagtcgctgcaaaaccgagctggaggagttcacgtac
gtgactcagttggccggactgacggatcacattcctctggggttcagactctccgtctct
ctggattcacacgcggtgtag
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