Labeo rohita (rohu): 127178666
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Entry
127178666 CDS
T09007
Symbol
nbn
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin
KO
K10867
nibrin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03440
Homologous recombination
lroh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127178666 (nbn)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127178666 (nbn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127178666 (nbn)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127178666 (nbn)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127178666 (nbn)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127178666 (nbn)
BRCA1-C complex
127178666 (nbn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
PCNA_C
Motif
Other DBs
NCBI-GeneID:
127178666
NCBI-ProteinID:
XP_050987634
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Position
16:complement(19891011..19911998)
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AA seq
834 aa
AA seq
DB search
MWKLRPTESGGESIVLLLGQEYVVGRKNCAILLSNDQSISRAHANLTVTEQAVTLKDSSK
YGTFVNGEKLETGSTKILQTGDKITFGVFESKFSLEKECIVVCSSCVDNEGKASLSQDLR
SIGGRLVNSWTLDCTHLVMPTVKVTIKTICALLCCRPIVKPEFFSAFNKAVQQKLPLPKP
EKFRPQIDEPSLAKEDVDLNARPERKSLFKGKTFLFLNSKQMKRLSQAVSCGGGVSQLFD
EGSLPISLLESSSTCVIDLTSGNSQAVIPPASKKLVDSVTQILHRNGLRFITESEIGLAA
IHINNQTYCNPCFTMQSESVKVKPVIAAATLSQNTAVDETALAAPSQNITAYVVNTELSQ
EQSRVVTSEISAVGETPEKTHHTKKGSTLSAANKPSSLNPESSTTRVVNETLMSSESVSV
VEPEQRMKKSSAPSGRGRVEPEGSVKLPAPPNASTTLKRSPQKQTALTNFFQPASKKRPR
EDSASSVQSEAKFSRKDSEDKEGEIQRSSFASKSHKTSHTTQNQHRSVSQSELSASLVQA
CGSSQSSGSKKRKEPEQDAPSAPEEPAAAADLEMSLEELESIMSDEMDEPPQTAANKKQR
LESGANSGINNPRLPNQQEGTESKGGKSTRNQQSGANNVQNLQLDRTGPAATNQASERQS
KRSSNQTLDLEAHSSAKKGKKTELEEVKEEEVSFVVNSRTQNGISQHSEPVVKQEMQAST
SKSGSENDPELPRRLLQIQFKSLTVSTSSRSKPSPLQTHDPNDKNVKKFRKKNVPGFNGL
PNIIGGRDLVAYNRSKNSELEEWLRQAAEEEKNNEREETLGDDLFRYNPKLRRK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaactgcgaccaaccgaatctggaggggaaagtattgttctgctcctgggtcag
gagtatgtggtcggccgtaaaaactgtgcgatcttgctgtccaatgatcagtccatcagc
cgtgcgcatgccaacctcactgtcactgagcaggcggtcactctaaaggacagctctaaa
tatggcactttcgtcaatggtgagaagcttgagactggctccacaaagatcctgcagaca
ggagacaaaatcacatttggagtcttcgagagcaaattcagtttggagaaagagtgcatt
gtggtgtgttcctcatgtgtcgataatgaagggaaagcctccctctctcaagatttgcga
tcgattgggggacgacttgtcaactcctggacacttgactgcacgcatctcgtcatgccc
actgtaaaggttaccataaagacaatctgtgcgttgctgtgctgtcggcccatagttaaa
cctgaattcttcagtgcgtttaacaaggctgtgcagcagaaactcccactgcctaaacct
gagaaatttaggcctcagattgatgagcccagcctggctaaagaggatgtagatctgaat
gcacgacctgagagaaagagcctcttcaaggggaaaacttttctgtttttgaactcaaaa
cagatgaagcgtttgagtcaggcggtgagttgtggaggtggggtgagccaacttttcgac
gagggctctctgccaatttcactcctggagtcaagcagcacctgtgtgattgacttgaca
tcagggaactcccaggctgtgatccctccagcctccaaaaagttggtggattctgtgact
cagattctgcacagaaacggcttgcgctttattactgaatctgagattggattggctgcc
attcatatcaataatcaaacatactgcaatccctgctttactatgcaatctgaatcagtg
aaagtgaaaccagtcattgctgcagcaacactttctcagaacactgctgtagatgagaca
gcgctcgcggcaccttcccagaatatcacagcctatgtggtcaacactgagctctctcag
gagcagagcagggtggttacaagtgagatcagtgcagttggtgagactccagagaagaca
caccacacaaagaagggctccacactgtcagcagcaaacaaaccctcatccctcaaccca
gaatcttccactactcgcgttgtcaatgagacgttgatgtcatctgaaagcgtcagcgtg
gttgagcctgagcagaggatgaagaaaagttctgctccctcgggcagagggcgagttgaa
cctgaaggttctgtgaaattgccagcgcctcctaatgccagcactacattaaaacggtct
ccccagaaacagacagccctcacaaacttcttccagcctgccagcaagaaaagaccacgt
gaagacagtgccagttctgtccagtcagaggccaagttctccagaaaagacagtgaggat
aaagagggtgagatccagcgaagttcgtttgccagtaaatctcacaaaacctcacataca
acccaaaatcaacaccgctccgtgtcacaatctgagctcagtgccagtctggttcaggct
tgtgggtccagtcagagctctggcagcaagaagagaaaggaaccagagcaagacgcccca
tcagcccctgaggaacctgcagcagctgccgatttagaaatgtcacttgaagagcttgag
tctataatgtctgatgaaatggatgagcctccgcagactgcagctaataaaaaacaacgt
cttgagtcaggagctaacagtggaatcaataacccacgattaccgaatcagcaagagggc
actgagtccaaaggcggaaaaagcacaaggaatcagcaaagtggtgccaacaacgttcaa
aacttgcagttggacagaacaggcccagctgcaacaaatcaggcctctgagaggcagtca
aagaggtcatccaatcaaacgctggatctggaagcacatagttcagcaaagaaggggaaa
aaaacagaacttgaagaggtcaaagaagaggaagtgtcatttgttgtgaattcaaggacc
caaaatggcatttcccagcactctgagcccgtagtcaaacaggaaatgcaggcctcaacc
tccaaatctggatccgagaatgatcctgagctgcccaggaggctcctacagattcagttt
aagtctctgactgtgagcacctcttccagatcaaaacccagcccattacagacccatgac
cctaatgacaagaatgtgaaaaagttccgcaagaaaaatgtccctggatttaatgggctg
cccaacattatcggaggccgggatcttgtggcttacaatcgcagtaagaactctgaactg
gaggagtggctcagacaggcagcagaggaggaaaaaaacaatgaacgggaggagactttg
ggagatgatttattcaggtacaaccctaaactgcgcaggaagtaa
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